RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 ZNF260Q3ZCT1 412 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 PLAC9Q5JTB6 97 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 Q6ZTK2 550 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 CELF2-AS1Q8N7Q2 184 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 ZNF611Q8N823 705 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 ZSCAN4Q8NAM6 433 aaPredicted RBP8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 OR51T1Q8NGJ9 327 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 OR5P3Q8WZ94 311 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 AQP3Q92482 292 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 ZC3HAV1LQ96H79 300 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 C7orf50Q9BRJ6 194 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 SELENOIQ9C0D9 397 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 PLEKHF2Q9H8W4 249 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 SCPEP1Q9HB40 452 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 CACNG2Q9Y698 323 aa8.09□□□□□ -1.11
PDLIM5-223ENST00000627587 FAM240BA0A1B0GVZ2 78 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 TMEM235A6NFC5 223 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 ZNF732B4DXR9 585 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 H7C417 338 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 HTR3BO95264 441 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 CYB5AP00167 134 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 LPLP06858 475 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 THBDP07204 575 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 SFTPBP07988 381 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 HAAOP46952 286 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 GNG3P63215 75 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 OLFML2AQ68BL7 652 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 WDR86Q86TI4 376 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 OR8S1Q8NH09 359 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 OR51F2Q8NH61 342 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 GPX8Q8TED1 209 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 RAB3CQ96E17 227 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 SEH1LQ96EE3 360 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 TM2D1Q9BX74 207 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 TAS2R8Q9NYW2 309 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 IL36GQ9NZH8 169 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 MTFP1Q9UDX5 166 aa8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 NOP16Q9Y3C1 178 aaKnown RBP8.09□□□□□ -1.12
PDLIM5-223ENST00000627587 A0A0B4J293 547 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 ANKRD20A5PA0PJZ0 165 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 F8VVB4 439 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 F8VWA3 439 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 MELTFP08582 738 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 SLC6A1P30531 599 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 ACTBP60709 375 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 ACTG1P63261 375 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 NKX6-1P78426 367 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 SSBP1Q04837 148 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 SNTB2Q13425 540 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 CDNFQ49AH0 187 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 PLA1AQ53H76 456 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 MBNL2Q5VZF2 373 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 SIGIRRQ6IA17 410 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 RGS7BPQ6MZT1 257 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 TMEM108Q6UXF1 575 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 SLC25A26Q70HW3 274 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 ZNF573Q86YE8 665 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 LRRC75A-AS1Q8N1F1 130 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 DUSP18Q8NEJ0 188 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 DEDD2Q8WXF8 326 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 MRPS24Q96EL2 167 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 Q96M66 194 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 MICU1Q9BPX6 476 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 ADAT1Q9BUB4 502 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 RTL8AQ9BWD3 113 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 MMP28Q9H239 520 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 NDRG3Q9UGV2 375 aa8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 PURGQ9UJV8 347 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-223ENST00000627587 ACANP16112 2415 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 FUOMA2VDF0 154 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 MEIS3P1A6NDR6 274 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 TIMM8AO60220 97 aaPredicted RBP8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 SSX5O60225 188 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 GSTP1P09211 210 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 CSF1P09603 554 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 PPP3CBP16298 524 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 HIST1H1DP16402 221 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 GNB3P16520 340 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 KITLGP21583 273 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 NPBWR2P48146 333 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 FABP6P51161 128 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 RPS23P62266 143 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 ARL6IP1Q15041 203 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 PCGF3Q3KNV8 242 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 PLET1Q6UQ28 207 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 CLEC9AQ6UXN8 241 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 MKXQ8IYA7 352 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 SAXO1Q8IYX7 474 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 OSR2Q8N2R0 312 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 Q8NFD4 153 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 OR8G5Q8NG78 346 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 LINC01560Q8TB33 94 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 UPRTQ96BW1 309 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 TMEM100Q9NV29 134 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 AKAP6Q13023 2319 aa8.07□□□□□ -1.12
PDLIM5-223ENST00000627587 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 A0A1B0GWJ7 208 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 NAP1L6A6NFF2 107 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 C3orf80F5H4A9 247 aa8.06□□□□□ -1.12
PDLIM5-223ENST00000627587 H0YL77 283 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms