RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 CD46P15529 392 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 RPL24P83731 157 aaKnown RBP7.95□□□□□ -1.14
VCL-206ENST00000623461 DEFB133Q30KQ1 61 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 ZNF343Q6P1L6 599 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 ZDHHC23Q8IYP9 409 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 RGP1Q92546 391 aaPredicted RBP7.95□□□□□ -1.14
VCL-206ENST00000623461 SLC52A3Q9NQ40 469 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 FRRS1LQ9P0K9 344 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 THAP10Q9P2Z0 257 aaPredicted RBP7.95□□□□□ -1.14
VCL-206ENST00000623461 EWSR1Q01844 656 aaKnown RBP eCLIP7.95□□□□□ -1.14
VCL-206ENST00000623461 NR0B2Q15466 257 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 H1FOOQ8IZA3 346 aaPredicted RBP7.95□□□□□ -1.14
VCL-206ENST00000623461 MTURNQ8N3F0 131 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 OR1L6Q8NGR2 347 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.95□□□□□ -1.14
VCL-206ENST00000623461 DNAJB12Q9NXW2 375 aaKnown RBP7.95□□□□□ -1.14
VCL-206ENST00000623461 NUP205Q92621 2012 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 CDS2O95674 445 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 EPPINO95925 133 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 MMP16P51512 607 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 MRPL58Q14197 206 aaKnown RBP7.95□□□□□ -1.14
VCL-206ENST00000623461 DCAF12L2Q5VW00 463 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 PECRQ9BY49 303 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 CD207Q9UJ71 328 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 CD82P27701 267 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 DCDP81605 110 aaKnown RBP7.95□□□□□ -1.14
VCL-206ENST00000623461 MAP1LC3CQ9BXW4 147 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 VSIG4Q9Y279 399 aa7.95□□□□□ -1.14
VCL-206ENST00000623461 ARR3P36575 388 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 IGFBP7Q16270 282 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 VN1R17PQ8TDU5 208 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 HS3ST3A1Q9Y663 406 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 PIAS3Q9Y6X2 628 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 ZNF891A8MT65 544 aaPredicted RBP7.94□□□□□ -1.14
VCL-206ENST00000623461 TRGC2P03986 189 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 HOXA6P31267 233 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 CDKN2AP42771 156 aaKnown RBP7.94□□□□□ -1.14
VCL-206ENST00000623461 RHOBP62745 196 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 ZNF117Q03924 483 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 GGTLC2Q14390 218 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 KCNAB1Q14722 419 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 TSEN54Q7Z6J9 526 aaKnown RBP7.94□□□□□ -1.14
VCL-206ENST00000623461 EDARADDQ8WWZ3 215 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 SDHCQ99643 169 aaPredicted RBP7.94□□□□□ -1.14
VCL-206ENST00000623461 KCNK7Q9Y2U2 307 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 DIRC3C9JPN6 131 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 COX7A2P2O60397 106 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 PPP2CBP62714 309 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 PPP2CAP67775 309 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 MRPS21P82921 87 aaKnown RBP7.94□□□□□ -1.14
VCL-206ENST00000623461 ADAD2Q8NCV1 583 aaKnown RBP7.94□□□□□ -1.14
VCL-206ENST00000623461 PARD6GQ9BYG4 376 aaPredicted RBP7.94□□□□□ -1.14
VCL-206ENST00000623461 PPOXP50336 477 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 NPDC1Q9NQX5 325 aaPredicted RBP7.94□□□□□ -1.14
VCL-206ENST00000623461 ALOX12BO75342 701 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 FGF8P55075 233 aaPredicted RBP7.94□□□□□ -1.14
VCL-206ENST00000623461 MRGPREQ86SM8 312 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 OR2D3Q8NGH3 330 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 OR4D11Q8NGI4 311 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 KTI12Q96EK9 354 aaPredicted RBP7.94□□□□□ -1.14
VCL-206ENST00000623461 MYEOVQ96EZ4 313 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 HDGFL3Q9Y3E1 203 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 TPRP12270 2363 aaKnown RBP7.94□□□□□ -1.14
VCL-206ENST00000623461 DHRS3O75911 302 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 BMP5P22003 454 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 PAX5Q02548 391 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 HIST3H3Q16695 136 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 ETV3LQ6ZN32 361 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 MRGPRX3Q96LB0 322 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 TSPAN32Q96QS1 320 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 TP53RKQ96S44 253 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 NDFIP1Q9BT67 221 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 UQCR10Q9UDW1 63 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 ZNF318Q5VUA4 2279 aa7.94□□□□□ -1.14
VCL-206ENST00000623461 RECKO95980 971 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 GYPAP02724 150 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 C9orf135Q5VTT2 229 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 DHRS11Q6UWP2 260 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 SLC25A26Q70HW3 274 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 C16orf82Q7Z2V1 217 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 LIMS2Q7Z4I7 341 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 AQP10Q96PS8 301 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 MED29Q9NX70 200 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 A0A1B0GX78 115 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 MED19A0JLT2 244 aaPredicted RBP7.93□□□□□ -1.14
VCL-206ENST00000623461 CBR3O75828 277 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 MMP9P14780 707 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 FAHP16930 419 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 SKP2Q13309 424 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 MPV17LQ2QL34 196 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 PRAMEF20Q5VT98 475 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 C17orf99Q6UX52 265 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 DCAF16Q9NXF7 216 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 KCNE5Q9UJ90 142 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 ANKRD31Q8N7Z5 1873 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 ZBTB25P24278 435 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 LAMTOR1Q6IAA8 161 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 MRPL43Q8N983 215 aaKnown RBP7.93□□□□□ -1.14
VCL-206ENST00000623461 ADAMTS17Q8TE56 1095 aa7.93□□□□□ -1.14
VCL-206ENST00000623461 S1PR3Q99500 378 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms