RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 MS4A3Q96HJ5 214 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 TMEM246Q9BRR3 403 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 PIGMQ9H3S5 423 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 ZNF286AQ9HBT8 521 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 NECAP2Q9NVZ3 263 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 SHPKQ9UHJ6 478 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 ANXA10Q9UJ72 324 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 CACNA1GO43497 2377 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 LRP5LA4QPB2 252 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 F5H5P2 479 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 SLC22A5O76082 557 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 IGLV1-44P01699 117 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 ACAA1P09110 424 aaPredicted RBP14.04□□□□□ -0.16
LDB3-208ENST00000623007 TMPRSS3P57727 454 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 DHRS2Q13268 280 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 TIMM23BQ5SRD1 257 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 Q6ZS49 121 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 NLRC3Q7RTR2 1065 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 PEG10Q86TG7 708 aaKnown RBP14.04□□□□□ -0.16
LDB3-208ENST00000623007 CALHM1Q8IU99 346 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 OR10AD1Q8NGE0 317 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 EHFQ9NZC4 300 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 MGAT4AQ9UM21 535 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 VSIG4Q9Y279 399 aa14.04□□□□□ -0.16
LDB3-208ENST00000623007 CNOT1A5YKK6 2376 aaKnown RBP14.03□□□□□ -0.16
LDB3-208ENST00000623007 J3QT63 122 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 PRRG2O14669 202 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 GEMIN2O14893 280 aaKnown RBP14.03□□□□□ -0.16
LDB3-208ENST00000623007 DUS4LO95620 317 aaKnown RBP14.03□□□□□ -0.16
LDB3-208ENST00000623007 SFTPBP07988 381 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 CD34P28906 385 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 IL13RA1P78552 427 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 DHODHQ02127 395 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 RBM39Q14498 530 aaKnown RBP14.03□□□□□ -0.16
LDB3-208ENST00000623007 FAM76BQ5HYJ3 339 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 DMRTC1Q5HYR2 192 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 ZNF324BQ6AW86 544 aaPredicted RBP14.03□□□□□ -0.16
LDB3-208ENST00000623007 SIGIRRQ6IA17 410 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 NCCRP1Q6ZVX7 275 aaPredicted RBP14.03□□□□□ -0.16
LDB3-208ENST00000623007 ZNF767PQ75MW2 155 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 WDR31Q8NA23 367 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 MITD1Q8WV92 249 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 CLEC4MQ9H2X3 399 aaPredicted RBP14.03□□□□□ -0.16
LDB3-208ENST00000623007 IFT22Q9H7X7 185 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 AK3Q9UIJ7 227 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 TUBD1Q9UJT1 453 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 GPR132Q9UNW8 380 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 SPEF1Q9Y4P9 236 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 HSPB11Q9Y547 144 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 DOCK7Q96N67 2140 aa14.03□□□□□ -0.16
LDB3-208ENST00000623007 CFAP54Q96N23 3096 aa14.02□□□□□ -0.16
LDB3-208ENST00000623007 HMSDA8MTL9 139 aa14.02□□□□□ -0.16
LDB3-208ENST00000623007 H7C1Q1 480 aa14.02□□□□□ -0.16
LDB3-208ENST00000623007 MSTNO14793 375 aa14.02□□□□□ -0.16
LDB3-208ENST00000623007 IL32P24001 234 aa14.02□□□□□ -0.16
LDB3-208ENST00000623007 ZBTB25P24278 435 aa14.02□□□□□ -0.16
LDB3-208ENST00000623007 CEACAM8P31997 349 aaPredicted RBP14.02□□□□□ -0.16
LDB3-208ENST00000623007 OPRM1P35372 400 aa14.02□□□□□ -0.16
LDB3-208ENST00000623007 FIP1L1Q6UN15 594 aaKnown RBP14.02□□□□□ -0.16
LDB3-208ENST00000623007 CXorf67Q86X51 503 aaPredicted RBP14.02□□□□□ -0.16
LDB3-208ENST00000623007 ZNF610Q8N9Z0 462 aa14.02□□□□□ -0.16
LDB3-208ENST00000623007 OR1J1Q8NGS3 322 aa14.02□□□□□ -0.16
LDB3-208ENST00000623007 ABHD17AQ96GS6 310 aa14.02□□□□□ -0.16
LDB3-208ENST00000623007 ZNF442Q9H7R0 627 aa14.02□□□□□ -0.16
LDB3-208ENST00000623007 DECR2Q9NUI1 292 aa14.02□□□□□ -0.16
LDB3-208ENST00000623007 RCC2Q9P258 522 aaKnown RBP14.02□□□□□ -0.16
LDB3-208ENST00000623007 WASF3Q9UPY6 502 aa14.02□□□□□ -0.16
LDB3-208ENST00000623007 C14orf166Q9Y224 244 aaKnown RBP14.02□□□□□ -0.16
LDB3-208ENST00000623007 MYO7BQ6PIF6 2116 aa14.02□□□□□ -0.17
LDB3-208ENST00000623007 OR7C1O76099 320 aaPredicted RBP14.01□□□□□ -0.17
LDB3-208ENST00000623007 PDGFAP04085 211 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 FCGR3AP08637 254 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 ZNF35P13682 527 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 CYCSP99999 105 aaKnown RBP14.01□□□□□ -0.17
LDB3-208ENST00000623007 SRSF4Q08170 494 aaKnown RBP14.01□□□□□ -0.17
LDB3-208ENST00000623007 ZNF718Q3SXZ3 478 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 C9orf62Q8N4C0 152 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 FAAP24Q9BTP7 215 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 OR51I2Q9H344 312 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 OPN4Q9UHM6 478 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 OSGIN2Q9Y236 505 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 ZNF292O60281 2723 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 C9orf170A2RU37 121 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 OR2AT4A6NND4 320 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 MCRIP1C9JLW8 97 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 CTXN2P0C2S0 81 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 SEC61A1P61619 476 aaKnown RBP14.01□□□□□ -0.17
LDB3-208ENST00000623007 IFITM2Q01629 132 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 RBPJQ06330 500 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 FOXF2Q12947 444 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 TBR1Q16650 682 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 PIGYQ3MUY2 71 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 OR2T2Q6IF00 324 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 OR52B4Q8NGK2 314 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 COQ8AQ8NI60 647 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 SLC25A40Q8TBP6 338 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 MUCL1Q96DR8 90 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 VRK1Q99986 396 aaPredicted RBP14.01□□□□□ -0.17
LDB3-208ENST00000623007 OR2J1Q9GZK6 312 aa14.01□□□□□ -0.17
LDB3-208ENST00000623007 ZFHX2Q9C0A1 2572 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms