RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 ZNF714Q96N38 554 aa13.35□□□□□ -0.27
TARDBP-225ENST00000621715 CADM1Q9BY67 442 aaKnown RBP13.35□□□□□ -0.27
TARDBP-225ENST00000621715 MROQ9BYG7 248 aa13.35□□□□□ -0.27
TARDBP-225ENST00000621715 CHST6Q9GZX3 395 aa13.35□□□□□ -0.27
TARDBP-225ENST00000621715 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.35□□□□□ -0.27
TARDBP-225ENST00000621715 POLDIP2Q9Y2S7 368 aa13.35□□□□□ -0.27
TARDBP-225ENST00000621715 DLGAP1O14490 977 aa13.34□□□□□ -0.27
TARDBP-225ENST00000621715 CST1P01037 141 aa13.34□□□□□ -0.27
TARDBP-225ENST00000621715 HMGN1P05114 100 aa13.34□□□□□ -0.27
TARDBP-225ENST00000621715 LPLP06858 475 aa13.34□□□□□ -0.27
TARDBP-225ENST00000621715 RAP2AP10114 183 aa13.34□□□□□ -0.27
TARDBP-225ENST00000621715 ESRRGP62508 458 aa13.34□□□□□ -0.27
TARDBP-225ENST00000621715 IL24Q13007 206 aa13.34□□□□□ -0.27
TARDBP-225ENST00000621715 TRIM25Q14258 630 aaKnown RBP13.34□□□□□ -0.27
TARDBP-225ENST00000621715 KCTD18Q6PI47 426 aaPredicted RBP13.34□□□□□ -0.27
TARDBP-225ENST00000621715 ELMOD2Q8IZ81 293 aa13.34□□□□□ -0.27
TARDBP-225ENST00000621715 LINC00482Q8N8I6 264 aa13.34□□□□□ -0.27
TARDBP-225ENST00000621715 SLAMF9Q96A28 289 aa13.34□□□□□ -0.27
TARDBP-225ENST00000621715 SLC25A19Q9HC21 320 aa13.34□□□□□ -0.27
TARDBP-225ENST00000621715 IKZF2Q9UKS7 526 aa13.34□□□□□ -0.27
TARDBP-225ENST00000621715 GTF2A1LQ9UNN4 478 aa13.34□□□□□ -0.27
TARDBP-225ENST00000621715 SESN1Q9Y6P5 492 aa13.34□□□□□ -0.27
TARDBP-225ENST00000621715 DYNC2H1Q8NCM8 4307 aaKnown RBP13.33□□□□□ -0.28
TARDBP-225ENST00000621715 FAM230AA0A1W2PPH8 454 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 FAM172BPA6NC97 362 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 B2RBV5 119 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 LOC110117498-PIK3R3F6TDL0 507 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 PRKYO43930 277 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 PSPNO60542 156 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 ZNF254O75437 659 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 PF4P02776 101 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 CALCBP10092 127 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 GDNFP39905 211 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 RIDAP52758 137 aaKnown RBP13.33□□□□□ -0.28
TARDBP-225ENST00000621715 SLC35A2P78381 396 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 UBE2V2Q15819 145 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 ZNF829Q3KNS6 432 aaPredicted RBP13.33□□□□□ -0.28
TARDBP-225ENST00000621715 ABCA11PQ4W5N1 156 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 HSP90B2PQ58FF3 399 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 MINOS1Q5TGZ0 78 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 C18orf65Q6ZTR6 163 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 GDPD3Q7L5L3 318 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 SSX6Q7RTT6 188 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 CENPVQ7Z7K6 275 aaPredicted RBP13.33□□□□□ -0.28
TARDBP-225ENST00000621715 ZNF676Q8N7Q3 588 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 NDNFQ8TB73 568 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 BCAS4Q8TDM0 211 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 PKIBQ9C010 78 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 TMEM133Q9H2Q1 129 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 MED4Q9NPJ6 270 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 TVP23BQ9NYZ1 205 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 MRM2Q9UI43 246 aaKnown RBP13.33□□□□□ -0.28
TARDBP-225ENST00000621715 OR52A1Q9UKL2 312 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 TSSC4Q9Y5U2 329 aaPredicted RBP13.33□□□□□ -0.28
TARDBP-225ENST00000621715 MINOS1-NBL1R4GNA1 71 aa13.33□□□□□ -0.28
TARDBP-225ENST00000621715 HUWE1Q7Z6Z7 4374 aaKnown RBP13.33□□□□□ -0.28
TARDBP-225ENST00000621715 STAB2Q8WWQ8 2551 aa13.32□□□□□ -0.28
TARDBP-225ENST00000621715 RYR2Q92736 4967 aa13.32□□□□□ -0.28
TARDBP-225ENST00000621715 CHRM2P08172 466 aa13.32□□□□□ -0.28
TARDBP-225ENST00000621715 DUSP1P28562 367 aa13.32□□□□□ -0.28
TARDBP-225ENST00000621715 GYS2P54840 703 aa13.32□□□□□ -0.28
TARDBP-225ENST00000621715 CXCR4P61073 352 aa13.32□□□□□ -0.28
TARDBP-225ENST00000621715 ODF4Q2M2E3 257 aa13.32□□□□□ -0.28
TARDBP-225ENST00000621715 BCL2L15Q5TBC7 163 aa13.32□□□□□ -0.28
TARDBP-225ENST00000621715 PIGWQ7Z7B1 504 aa13.32□□□□□ -0.28
TARDBP-225ENST00000621715 CANT1Q8WVQ1 401 aa13.32□□□□□ -0.28
TARDBP-225ENST00000621715 ITFG2Q969R8 447 aa13.32□□□□□ -0.28
TARDBP-225ENST00000621715 CCDC124Q96CT7 223 aaKnown RBP13.32□□□□□ -0.28
TARDBP-225ENST00000621715 RCC1LQ96I51 464 aaKnown RBP13.32□□□□□ -0.28
TARDBP-225ENST00000621715 NDE1Q9NXR1 346 aa13.32□□□□□ -0.28
TARDBP-225ENST00000621715 DNAJB9Q9UBS3 223 aa13.32□□□□□ -0.28
TARDBP-225ENST00000621715 R4GMQ9 66 aa13.32□□□□□ -0.28
TARDBP-225ENST00000621715 DNAH7Q8WXX0 4024 aa13.31□□□□□ -0.28
TARDBP-225ENST00000621715 CCL1P22362 96 aa13.31□□□□□ -0.28
TARDBP-225ENST00000621715 AZGP1P25311 298 aaKnown RBP13.31□□□□□ -0.28
TARDBP-225ENST00000621715 NPBWR2P48146 333 aa13.31□□□□□ -0.28
TARDBP-225ENST00000621715 MEF2CQ06413 473 aaPredicted RBP13.31□□□□□ -0.28
TARDBP-225ENST00000621715 SNAPC1Q16533 368 aa13.31□□□□□ -0.28
TARDBP-225ENST00000621715 PRAMEF5Q5TYX0 476 aa13.31□□□□□ -0.28
TARDBP-225ENST00000621715 ZNF322Q6U7Q0 402 aaPredicted RBP13.31□□□□□ -0.28
TARDBP-225ENST00000621715 ASB17Q8WXJ9 295 aa13.31□□□□□ -0.28
TARDBP-225ENST00000621715 SNX22Q96L94 193 aa13.31□□□□□ -0.28
TARDBP-225ENST00000621715 CEP19Q96LK0 163 aa13.31□□□□□ -0.28
TARDBP-225ENST00000621715 CLEC7AQ9BXN2 247 aa13.31□□□□□ -0.28
TARDBP-225ENST00000621715 ADGRL4Q9HBW9 690 aa13.31□□□□□ -0.28
TARDBP-225ENST00000621715 RBFOX1Q9NWB1 397 aaKnown RBP13.31□□□□□ -0.28
TARDBP-225ENST00000621715 ARL2BPQ9Y2Y0 163 aa13.31□□□□□ -0.28
TARDBP-225ENST00000621715 LINC00312Q9Y6C7 94 aa13.31□□□□□ -0.28
TARDBP-225ENST00000621715 HAND1O96004 215 aa13.3□□□□□ -0.28
TARDBP-225ENST00000621715 ALDOBP05062 364 aa13.3□□□□□ -0.28
TARDBP-225ENST00000621715 CCDC159P0C7I6 412 aa13.3□□□□□ -0.28
TARDBP-225ENST00000621715 T-ENOLP0DO92 83 aa13.3□□□□□ -0.28
TARDBP-225ENST00000621715 OR3A1P47881 315 aa13.3□□□□□ -0.28
TARDBP-225ENST00000621715 GK3PQ14409 553 aa13.3□□□□□ -0.28
TARDBP-225ENST00000621715 GRK1Q15835 563 aa13.3□□□□□ -0.28
TARDBP-225ENST00000621715 LCN1P1Q5VSP4 162 aa13.3□□□□□ -0.28
TARDBP-225ENST00000621715 SLC25A26Q70HW3 274 aa13.3□□□□□ -0.28
TARDBP-225ENST00000621715 MRPL41Q8IXM3 137 aaKnown RBP13.3□□□□□ -0.28
TARDBP-225ENST00000621715 WWC2-AS2Q96NR7 200 aa13.3□□□□□ -0.28
TARDBP-225ENST00000621715 CNN2Q99439 309 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms