RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 Q6ZT83 130 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 BHLHA15Q7RTS1 189 aaPredicted RBP9.03□□□□□ -0.96
VPS11-208ENST00000621676 OR11H7Q8NGC8 314 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 APOBEC3DQ96AK3 386 aaPredicted RBP9.03□□□□□ -0.96
VPS11-208ENST00000621676 BCL2L14Q9BZR8 327 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 FXYD6Q9H0Q3 95 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 FANCFQ9NPI8 374 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 NOTCH3Q9UM47 2321 aa9.03□□□□□ -0.96
VPS11-208ENST00000621676 ERCC1P07992 297 aaPredicted RBP9.02□□□□□ -0.97
VPS11-208ENST00000621676 VSIG10L2P0DP72 767 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 PDZK1IP1Q13113 114 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 ZDHHC23Q8IYP9 409 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 AKAP1Q92667 903 aaKnown RBP eCLIP9.02□□□□□ -0.97
VPS11-208ENST00000621676 GPR137Q96N19 417 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 AK3Q9UIJ7 227 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 MYO9AB2RTY4 2548 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 IGKV3D-15A0A087WSY6 115 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 OR2AT4A6NND4 320 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 TRAPPC2LH3BP13 241 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 H7C417 338 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 HSPA12AO43301 675 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 SSX5O60225 188 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 SCGB1D2O95969 90 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 HLA-AP01891 365 aaKnown RBP9.02□□□□□ -0.97
VPS11-208ENST00000621676 OR8G1Q15617 311 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 MEX3BQ6ZN04 569 aaKnown RBP9.02□□□□□ -0.97
VPS11-208ENST00000621676 FGFRL1Q8N441 504 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 VRK1Q99986 396 aaPredicted RBP9.02□□□□□ -0.97
VPS11-208ENST00000621676 ADAT1Q9BUB4 502 aaKnown RBP9.02□□□□□ -0.97
VPS11-208ENST00000621676 NPAP1Q9NZP6 1156 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 MTFP1Q9UDX5 166 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 ZNF175Q9Y473 711 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 C5orf51A6NDU8 294 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 POM121CA8CG34 1229 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 PLAUP00749 431 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 GALP22466 123 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 ZNF81P51508 661 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 PLA1AQ53H76 456 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 SECTM1Q8WVN6 248 aa9.02□□□□□ -0.97
VPS11-208ENST00000621676 A0A1W2PPE3 182 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 MPTX1A8MV57 137 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 ADAP1O75689 374 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 ARR3P36575 388 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 CAPZA1P52907 286 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 IZUMO4Q1ZYL8 232 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 DCAF12L2Q5VW00 463 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 SIGIRRQ6IA17 410 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 MUC20Q8N307 709 aaPredicted RBP9.01□□□□□ -0.97
VPS11-208ENST00000621676 OR11L1Q8NGX0 322 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 SNAPC3Q92966 411 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 LEAP2Q969E1 77 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 HRNRQ86YZ3 2850 aaPredicted RBP9.01□□□□□ -0.97
VPS11-208ENST00000621676 LINC01387J3KSC0 135 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 DNPH1O43598 174 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 CRYAAP02489 173 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 AKAIN1P0CW23 69 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 HIST1H1DP16402 221 aaKnown RBP9.01□□□□□ -0.97
VPS11-208ENST00000621676 DLX5P56178 289 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 EDDM3BP56851 147 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 BCL2A1Q16548 175 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 ZNF260Q3ZCT1 412 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 MKXQ8IYA7 352 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 OSR2Q8N2R0 312 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 NKAIN3Q8N8D7 197 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 OR6F1Q8NGZ6 308 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 RPS4Y2Q8TD47 263 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 NANOS1Q8WY41 292 aaKnown RBP9.01□□□□□ -0.97
VPS11-208ENST00000621676 ST8SIA4Q92187 359 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 MARS2Q96GW9 593 aaKnown RBP9.01□□□□□ -0.97
VPS11-208ENST00000621676 ST6GAL2Q96JF0 529 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 C1orf147Q96MC9 270 aaPredicted RBP9.01□□□□□ -0.97
VPS11-208ENST00000621676 METRNQ9UJH8 293 aa9.01□□□□□ -0.97
VPS11-208ENST00000621676 ZNF724A8MTY0 619 aa9□□□□□ -0.97
VPS11-208ENST00000621676 PEX14O75381 377 aa9□□□□□ -0.97
VPS11-208ENST00000621676 CNOT4O95628 575 aaKnown RBP9□□□□□ -0.97
VPS11-208ENST00000621676 CRYABP02511 175 aaKnown RBP9□□□□□ -0.97
VPS11-208ENST00000621676 APOC1P02654 83 aa9□□□□□ -0.97
VPS11-208ENST00000621676 LPLP06858 475 aa9□□□□□ -0.97
VPS11-208ENST00000621676 SCTP09683 121 aa9□□□□□ -0.97
VPS11-208ENST00000621676 OTX1P32242 354 aaPredicted RBP9□□□□□ -0.97
VPS11-208ENST00000621676 ZNF154Q13106 437 aa9□□□□□ -0.97
VPS11-208ENST00000621676 KCNMB1Q16558 191 aa9□□□□□ -0.97
VPS11-208ENST00000621676 CRIP3Q6Q6R5 217 aa9□□□□□ -0.97
VPS11-208ENST00000621676 WDR31Q8NA23 367 aa9□□□□□ -0.97
VPS11-208ENST00000621676 OR5L1Q8NGL2 311 aa9□□□□□ -0.97
VPS11-208ENST00000621676 OR5H2Q8NGV7 314 aa9□□□□□ -0.97
VPS11-208ENST00000621676 PHYHIPQ92561 330 aa9□□□□□ -0.97
VPS11-208ENST00000621676 CCL17Q92583 94 aa9□□□□□ -0.97
VPS11-208ENST00000621676 TMEM246Q9BRR3 403 aa9□□□□□ -0.97
VPS11-208ENST00000621676 ZNF2Q9BSG1 426 aaPredicted RBP9□□□□□ -0.97
VPS11-208ENST00000621676 PECRQ9BY49 303 aa9□□□□□ -0.97
VPS11-208ENST00000621676 ATP23Q9Y6H3 246 aa9□□□□□ -0.97
VPS11-208ENST00000621676 IGHV1-18A0A0C4DH31 117 aa9□□□□□ -0.97
VPS11-208ENST00000621676 A0A1B0GW55 424 aa9□□□□□ -0.97
VPS11-208ENST00000621676 AQP7O14520 342 aa9□□□□□ -0.97
VPS11-208ENST00000621676 ZG16O60844 167 aa9□□□□□ -0.97
VPS11-208ENST00000621676 DUX4L2P0CJ85 424 aa9□□□□□ -0.97
VPS11-208ENST00000621676 DUX4L3P0CJ86 424 aa9□□□□□ -0.97
VPS11-208ENST00000621676 DUX4L4P0CJ87 422 aa9□□□□□ -0.97
VPS11-208ENST00000621676 DUX4L5P0CJ88 424 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms