RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 ARL11Q969Q4 196 aa3.74□□□□□ -1.81
SEC22B-202ENST00000618538 REEP6Q96HR9 211 aa3.74□□□□□ -1.81
SEC22B-202ENST00000618538 NECAB3Q96P71 396 aaPredicted RBP3.74□□□□□ -1.81
SEC22B-202ENST00000618538 SMIM3Q9BZL3 60 aa3.74□□□□□ -1.81
SEC22B-202ENST00000618538 ULBP2Q9BZM5 246 aa3.74□□□□□ -1.81
SEC22B-202ENST00000618538 PARP12Q9H0J9 701 aaKnown RBP3.74□□□□□ -1.81
SEC22B-202ENST00000618538 METTL8Q9H825 291 aaKnown RBP3.74□□□□□ -1.81
SEC22B-202ENST00000618538 WDR54Q9H977 334 aa3.74□□□□□ -1.81
SEC22B-202ENST00000618538 ELL3Q9HB65 397 aaPredicted RBP3.74□□□□□ -1.81
SEC22B-202ENST00000618538 RHOFQ9HBH0 211 aa3.74□□□□□ -1.81
SEC22B-202ENST00000618538 PCDHB16Q9NRJ7 776 aa3.74□□□□□ -1.81
SEC22B-202ENST00000618538 DEPPQ9NTK1 212 aa3.74□□□□□ -1.81
SEC22B-202ENST00000618538 HPF1Q9NWY4 346 aa3.74□□□□□ -1.81
SEC22B-202ENST00000618538 RCC2Q9P258 522 aaKnown RBP3.74□□□□□ -1.81
SEC22B-202ENST00000618538 ANXA10Q9UJ72 324 aa3.74□□□□□ -1.81
SEC22B-202ENST00000618538 TUBD1Q9UJT1 453 aa3.74□□□□□ -1.81
SEC22B-202ENST00000618538 PILRBQ9UKJ0 227 aa3.74□□□□□ -1.81
SEC22B-202ENST00000618538 MRPS17Q9Y2R5 130 aaKnown RBP3.74□□□□□ -1.81
SEC22B-202ENST00000618538 PTRH2Q9Y3E5 179 aaKnown RBP3.74□□□□□ -1.81
SEC22B-202ENST00000618538 RFNGQ9Y644 331 aa3.74□□□□□ -1.81
SEC22B-202ENST00000618538 AHCTF1Q8WYP5 2266 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 hCG_38984A0A1B0GV85 526 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 FAM230AA0A1W2PPH8 454 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 ZNF503-AS2A6NEH8 195 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 NPIPA2E9PIF3 369 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 F8W036 122 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 NPIPA3F8WFD2 350 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 NTN3O00634 580 aaPredicted RBP3.73□□□□□ -1.81
SEC22B-202ENST00000618538 TP53I11O14683 189 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 XRCC2O43543 280 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 FBXO24O75426 580 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 CA11O75493 328 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 MED6O75586 246 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 TSPAN9O75954 239 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 C1QL1O75973 258 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 DIRAS3O95661 229 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 IFNA2P01563 188 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 MBPP02686 304 aaPredicted RBP3.73□□□□□ -1.81
SEC22B-202ENST00000618538 CD5P06127 495 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 CTSDP07339 412 aaPredicted RBP3.73□□□□□ -1.81
SEC22B-202ENST00000618538 OR5AC1P0C628 307 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 OR5H8P0DN80 308 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 TMEM225BP0DP42 221 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 TDGF1P13385 188 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 ZNF32P17041 273 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 LMO1P25800 156 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 CAV2P51636 162 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 MTCP1P56278 107 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 TMEM33P57088 247 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 MLF1P58340 268 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 BLOC1S1P78537 153 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 CYCSP99999 105 aaKnown RBP3.73□□□□□ -1.81
SEC22B-202ENST00000618538 PSG4Q00888 419 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 ZNF92Q03936 586 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 TMEM187Q14656 261 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 RAB35Q15286 201 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 SURF2Q15527 256 aaPredicted RBP3.73□□□□□ -1.81
SEC22B-202ENST00000618538 PMS2CLQ68D20 193 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 DHRS11Q6UWP2 260 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 ASCL4Q6XD76 172 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 LYZL2Q7Z4W2 148 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 YRDCQ86U90 279 aaKnown RBP3.73□□□□□ -1.81
SEC22B-202ENST00000618538 CALHM1Q8IU99 346 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 MAML2Q8IZL2 1156 aaPredicted RBP3.73□□□□□ -1.81
SEC22B-202ENST00000618538 SVBPQ8N300 66 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 TMEM156Q8N614 296 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 OR52M1Q8NGK5 317 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 MAFAQ8NHW3 353 aaPredicted RBP3.73□□□□□ -1.81
SEC22B-202ENST00000618538 LYPD6BQ8NI32 183 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 ADGRG7Q96K78 797 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 GPHA2Q96T91 129 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 WNT5BQ9H1J7 359 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 SH3BGRL3Q9H299 93 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 PRO3102Q9H379 93 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 SAV1Q9H4B6 383 aaPredicted RBP3.73□□□□□ -1.81
SEC22B-202ENST00000618538 TAF9BQ9HBM6 251 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 CRLF2Q9HC73 371 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 TMEM38BQ9NVV0 291 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 PLEKHJ1Q9NW61 149 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 IL36RNQ9UBH0 155 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 DNAJB11Q9UBS4 358 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 GHRLQ9UBU3 117 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 C19orf25Q9UFG5 118 aaPredicted RBP3.73□□□□□ -1.81
SEC22B-202ENST00000618538 NXT1Q9UKK6 140 aaKnown RBP3.73□□□□□ -1.81
SEC22B-202ENST00000618538 PRELID3BQ9Y3B1 194 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 ZNF407Q9C0G0 2248 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 NCOR1O75376 2440 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 DOCK10Q96BY6 2186 aa3.73□□□□□ -1.81
SEC22B-202ENST00000618538 A0A087WZY1 265 aa3.72□□□□□ -1.81
SEC22B-202ENST00000618538 A0A1B0GW55 424 aa3.72□□□□□ -1.81
SEC22B-202ENST00000618538 MED19A0JLT2 244 aaPredicted RBP3.72□□□□□ -1.81
SEC22B-202ENST00000618538 CCDC85CA6NKD9 419 aa3.72□□□□□ -1.81
SEC22B-202ENST00000618538 FAM229AH3BQW9 127 aa3.72□□□□□ -1.81
SEC22B-202ENST00000618538 K7EPK0 472 aa3.72□□□□□ -1.81
SEC22B-202ENST00000618538 SGCEO43556 437 aa3.72□□□□□ -1.81
SEC22B-202ENST00000618538 TLX3O43711 291 aaPredicted RBP3.72□□□□□ -1.81
SEC22B-202ENST00000618538 CXCL13O43927 109 aa3.72□□□□□ -1.81
SEC22B-202ENST00000618538 EIF1BO60739 113 aaKnown RBP3.72□□□□□ -1.81
SEC22B-202ENST00000618538 MTRF1O75570 445 aaKnown RBP3.72□□□□□ -1.81
SEC22B-202ENST00000618538 FARS2O95363 451 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms