RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 TLE1Q04724 770 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 SLC25A47Q6Q0C1 308 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 BHLHA15Q7RTS1 189 aaPredicted RBP12.2□□□□□ -0.46
CIITA-213ENST00000618327 CXorf67Q86X51 503 aaPredicted RBP12.2□□□□□ -0.46
CIITA-213ENST00000618327 PARP12Q9H0J9 701 aaKnown RBP12.2□□□□□ -0.46
CIITA-213ENST00000618327 SLC7A10Q9NS82 523 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 SLC23A1Q9UHI7 598 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 CYB5R1Q9UHQ9 305 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 FZR1Q9UM11 496 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 LRP5LA4QPB2 252 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 ZFP92A6NM28 416 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 C17orf112F2Z3M2 114 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 CDC14BO60729 498 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 CLDN1O95832 211 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 MGST1P10620 155 aaKnown RBP12.2□□□□□ -0.46
CIITA-213ENST00000618327 THBS3P49746 956 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 F2RL1P55085 397 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 TMEM108Q6UXF1 575 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 HIST2H3AQ71DI3 136 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 SHISA5Q8N114 240 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 OR51H1Q8NH63 302 aa12.2□□□□□ -0.46
CIITA-213ENST00000618327 A0A1B0GUH1 482 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 ZNF354AO60765 605 aaPredicted RBP12.19□□□□□ -0.46
CIITA-213ENST00000618327 OR2C1O95371 312 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 GLI4P10075 376 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 RAB11AP62491 216 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 ROM1Q03395 351 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 PDCD1Q15116 288 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 ACOT7LQ6ZUV0 252 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 CDH26Q8IXH8 852 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 FAM58AQ8N1B3 248 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 OR5M8Q8NGP6 311 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 TINAGL1Q9GZM7 467 aaPredicted RBP12.19□□□□□ -0.46
CIITA-213ENST00000618327 MIXL1Q9H2W2 232 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 PLEKHF2Q9H8W4 249 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 MPC1Q9Y5U8 109 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 hCG_1809904A0A1W2PP81 198 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 A0A1W2PPE2 198 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 A0A1W2PR64 198 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 A0A1W2PRV1 198 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 FBXO17Q96EF6 278 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 TIMD4Q96H15 378 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 NEURL2Q9BR09 285 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 KCNK15Q9H427 330 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 MRPL22Q9NWU5 206 aaKnown RBP12.19□□□□□ -0.46
CIITA-213ENST00000618327 PRELID3BQ9Y3B1 194 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 H7BYZ3 331 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 TTRP02766 147 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 PTGER4P35408 488 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 LINC01590Q5TEZ4 76 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 LINC00114Q6XXX2 140 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 SUMF1Q8NBK3 374 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 NANPQ8TBE9 248 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 MESP1Q9BRJ9 268 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 AMDHD2Q9Y303 409 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 OR5B21A6NL26 309 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 FAM90A27PA6NNH2 459 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 DFFBO76075 338 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 H2AFB1P0C5Y9 115 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 OR4E1P0C645 316 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 PSMB3P49720 205 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 BAMBIQ13145 260 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 RNF212Q495C1 297 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 C20orf196Q8IYI0 205 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 ARRDC1Q8N5I2 433 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 C15orf54Q8N8G6 183 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 RELL2Q8NC24 303 aaPredicted RBP12.19□□□□□ -0.46
CIITA-213ENST00000618327 SLC25A32Q9H2D1 315 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 PLSCR3Q9NRY6 295 aa12.19□□□□□ -0.46
CIITA-213ENST00000618327 ZNF724A8MTY0 619 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 ST8SIA3O43173 380 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 NME2P1O60361 137 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 RFPL3SP0C7P2 107 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 FAM234AQ9H0X4 552 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 WDR1O75083 606 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 KLF7O75840 302 aaPredicted RBP12.18□□□□□ -0.46
CIITA-213ENST00000618327 CPN1P15169 458 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 UBE2MP61081 183 aaKnown RBP12.18□□□□□ -0.46
CIITA-213ENST00000618327 ZNF468Q5VIY5 522 aaPredicted RBP12.18□□□□□ -0.46
CIITA-213ENST00000618327 OR2G3Q8NGZ4 309 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 CA5BP1Q8WTZ4 195 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 SIGLEC12Q96PQ1 595 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 SRXN1Q9BYN0 137 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 SEMA5BQ9P283 1151 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 V9GYH0 126 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 NPIPB13A6NJU9 1138 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 NPIPB4C9JG80 1138 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 JTBO76095 146 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 P2RX3P56373 397 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 BAXQ07812 192 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 TEX30Q5JUR7 227 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 TMEM88Q6PEY1 159 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 FAM214BQ7L5A3 538 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 FDCSPQ8NFU4 85 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 CHST6Q9GZX3 395 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 LTBP2Q14767 1821 aa12.18□□□□□ -0.46
CIITA-213ENST00000618327 SNRPGP15A8MWD9 76 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 TNFRSF1AP19438 455 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 ACKR3P25106 362 aa12.17□□□□□ -0.46
CIITA-213ENST00000618327 PHYHD1Q5SRE7 291 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms