RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CA6P23280 308 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 OPRM1P35372 400 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 LGALSLQ3ZCW2 172 aaPredicted RBP14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 LYG2Q86SG7 212 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 CXorf67Q86X51 503 aaPredicted RBP14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 MBD3L2Q8NHZ7 208 aaPredicted RBP14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 OR2J1Q9GZK6 312 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 PPA2Q9H2U2 334 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 OPN4Q9UHM6 478 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 PROCRQ9UNN8 238 aa14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 NOP16Q9Y3C1 178 aaKnown RBP14.87□□□□□ -0.03
PCDHGC3-205ENST00000617641 DMXL2Q8TDJ6 3036 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 FAM221AA4D161 298 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 F5H5P2 479 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 MKRN2OSH3BPM6 223 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 PDCD6O75340 191 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 S100A1P23297 94 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 CD34P28906 385 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 HOXC12P31275 282 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 OVCH2Q7RTZ1 564 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 RPRMLQ8N4K4 120 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 MTCH1Q9NZJ7 389 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 MPC1Q9Y5U8 109 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 INTS1Q8N201 2190 aaKnown RBP14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 DSPP15924 2871 aaKnown RBP14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 C9orf170A2RU37 121 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 SYNGR1O43759 233 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 WDR1O75083 606 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 OR7C1O76099 320 aaPredicted RBP14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 CGAP01215 116 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 BAMBIQ13145 260 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 FBXW12Q6X9E4 464 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 LHFPL1Q86WI0 220 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 TMEM17Q86X19 198 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 SPACA3Q8IXA5 215 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 SAXO1Q8IYX7 474 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 C1orf162Q8NEQ5 155 aaPredicted RBP14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 Q8NFD4 153 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 PRELID1Q9Y255 219 aa14.86□□□□□ -0.03
PCDHGC3-205ENST00000617641 IL2RAP01589 272 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 CRYABP02511 175 aaKnown RBP14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 FCGR3AP08637 254 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 HOXB1P14653 301 aaPredicted RBP14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 CBR1P16152 277 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 PI3P19957 117 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 VAMP1P23763 118 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 SSTR2P30874 369 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 IL13RA1P78552 427 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 NHLH1Q02575 133 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 LY6G6FQ5SQ64 297 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 AADACL3Q5VUY0 350 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 LIN54Q6MZP7 749 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 HAGHLQ6PII5 290 aaPredicted RBP14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 ABHD17AQ96GS6 310 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 C5orf66Q9H5L9 145 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 IL36RNQ9UBH0 155 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 GPR132Q9UNW8 380 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 OSGIN2Q9Y236 505 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 FAM215AQ9Y5M1 114 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 APC2O95996 2303 aa14.85□□□□□ -0.03
PCDHGC3-205ENST00000617641 J3QW42 95 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 FUT3P21217 361 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 MPPED2Q15777 294 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 C3P1Q6ZMU1 363 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 TMEM200AQ86VY9 491 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 MKXQ8IYA7 352 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 SLC25A40Q8TBP6 338 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 CASTOR1Q8WTX7 329 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 SLC23A1Q9UHI7 598 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 ANXA10Q9UJ72 324 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 SSUH2Q9Y2M2 353 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 ANKRD11Q6UB99 2663 aaPredicted RBP14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 CEACAM18A8MTB9 384 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 TRAPPC2LH3BP13 241 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 IGKV3-15P01624 115 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 DTYMKP23919 212 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 ZNF81P51508 661 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 UCP2P55851 309 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 GNG3P63215 75 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 ELP2Q6IA86 826 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 FAHD2BQ6P2I3 314 aaPredicted RBP14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 OR1J1Q8NGS3 322 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 FAHD2AQ96GK7 314 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 BOD1Q96IK1 185 aa14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 ZNF71Q9NQZ8 489 aaPredicted RBP14.84□□□□□ -0.03
PCDHGC3-205ENST00000617641 OR5H14A6NHG9 310 aa14.83□□□□□ -0.03
PCDHGC3-205ENST00000617641 FPR2P25090 351 aa14.83□□□□□ -0.03
PCDHGC3-205ENST00000617641 FGF12P61328 243 aa14.83□□□□□ -0.03
PCDHGC3-205ENST00000617641 ALKBH6Q3KRA9 238 aa14.83□□□□□ -0.03
PCDHGC3-205ENST00000617641 TMEM230Q96A57 120 aa14.83□□□□□ -0.03
PCDHGC3-205ENST00000617641 ZNF488Q96MN9 340 aa14.83□□□□□ -0.03
PCDHGC3-205ENST00000617641 ZNF442Q9H7R0 627 aa14.83□□□□□ -0.03
PCDHGC3-205ENST00000617641 EDARQ9UNE0 448 aa14.83□□□□□ -0.03
PCDHGC3-205ENST00000617641 TP53TG5Q9Y2B4 290 aa14.83□□□□□ -0.03
PCDHGC3-205ENST00000617641 ATMQ13315 3056 aa14.83□□□□□ -0.04
PCDHGC3-205ENST00000617641 OR5B21A6NL26 309 aa14.83□□□□□ -0.04
PCDHGC3-205ENST00000617641 C3orf80F5H4A9 247 aa14.83□□□□□ -0.04
PCDHGC3-205ENST00000617641 CCSO14618 274 aa14.83□□□□□ -0.04
PCDHGC3-205ENST00000617641 TAS2R31P59538 309 aa14.83□□□□□ -0.04
PCDHGC3-205ENST00000617641 PEG10Q86TG7 708 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms