RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 SLC25A33Q9BSK2 321 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 CISD1Q9NZ45 108 aaKnown RBP7.88□□□□□ -1.15
TTC28-208ENST00000612946 NTNG1Q9Y2I2 539 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 ASTLQ6HA08 431 aaPredicted RBP7.88□□□□□ -1.15
TTC28-208ENST00000612946 CPEB2Q7Z5Q1 589 aaKnown RBP7.88□□□□□ -1.15
TTC28-208ENST00000612946 TP53I13Q8NBR0 393 aaPredicted RBP7.88□□□□□ -1.15
TTC28-208ENST00000612946 OR10G4Q8NGN3 311 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 OR10G9Q8NGN4 311 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 OR10G7Q8NGN6 311 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 OTOSQ8NHW6 89 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 NXF5Q9H1B4 397 aaKnown RBP7.88□□□□□ -1.15
TTC28-208ENST00000612946 TMED7-TICAM2A0A0A6YYA0 188 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 CD79AP11912 226 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 MUC1P15941 1255 aaPredicted RBP7.88□□□□□ -1.15
TTC28-208ENST00000612946 FAM181AQ8N9Y4 354 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 ADOQ96SZ5 270 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 SPHK2Q9NRA0 654 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 RALGAPA2Q2PPJ7 1873 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 H3BML4 177 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 FMODQ06828 376 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 ISXQ2M1V0 245 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 CPEB3Q8NE35 698 aaKnown RBP7.88□□□□□ -1.15
TTC28-208ENST00000612946 R3HDM4Q96D70 268 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 AQP10Q96PS8 301 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 MIEN1Q9BRT3 115 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 TRBV23OR9-2A0A075B6M9 112 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 IGKV6D-21A0A0A0MT36 114 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 RAB32Q13637 225 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 PFN4Q8NHR9 129 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 RAB33BQ9H082 229 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 TIMM9Q9Y5J7 89 aa7.88□□□□□ -1.15
TTC28-208ENST00000612946 MED12LQ86YW9 2145 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 FAAP20Q6NZ36 180 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 LIAT1Q6ZQX7 453 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 ZNF511Q8NB15 262 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 PELI1Q96FA3 418 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 OR6C1Q96RD1 312 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 SCGB1A1P11684 91 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 SRSF9Q13242 221 aaKnown RBP eCLIP7.87□□□□□ -1.15
TTC28-208ENST00000612946 HIKESHIQ53FT3 197 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 OR8B3Q8NGG8 313 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 HMGCLL1Q8TB92 370 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 HSPB9Q9BQS6 159 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 CHRNA10Q9GZZ6 450 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 OR2W1Q9Y3N9 320 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 LRRK1Q38SD2 2015 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 TRBV11-1A0A0K0K1C0 115 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 IGLON5A6NGN9 336 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 TMEM250H0YL14 139 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 EDN3P14138 238 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 SEMG2Q02383 582 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 GDF6Q6KF10 455 aaPredicted RBP7.87□□□□□ -1.15
TTC28-208ENST00000612946 IL17FQ96PD4 163 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 PBOV1Q9GZY1 135 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 PLA2G10O15496 165 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 AGFG1P52594 562 aaKnown RBP7.87□□□□□ -1.15
TTC28-208ENST00000612946 PFN3P60673 137 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 IFITM2Q01629 132 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 DEFB115Q30KQ5 88 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 ZNF660Q6AZW8 331 aaPredicted RBP7.87□□□□□ -1.15
TTC28-208ENST00000612946 LAIR1Q6GTX8 287 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 MEX3DQ86XN8 651 aaKnown RBP7.87□□□□□ -1.15
TTC28-208ENST00000612946 GABRG3Q99928 467 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 HSPB7Q9UBY9 170 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 HS3ST2Q9Y278 367 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 RPS23P62266 143 aaKnown RBP7.87□□□□□ -1.15
TTC28-208ENST00000612946 SHBQ15464 509 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 CD226Q15762 336 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 C16orf82Q7Z2V1 217 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 SIRT6Q8N6T7 355 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 BEND2Q8NDZ0 799 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 NUDT10Q8NFP7 164 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 GALMQ96C23 342 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 ABHD1Q96SE0 405 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 CDCP1Q9H5V8 836 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 GYPAP02724 150 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 CTSCP53634 463 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 ASB5Q8WWX0 329 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 ISOC2Q96AB3 205 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 GUCD1Q96NT3 240 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 GKN1Q9NS71 199 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 SOD3P08294 240 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 F2RP25116 425 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 MICBQ29980 383 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 MAMSTRQ6ZN01 415 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 A0A1W2PRU2 124 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 DDNO94850 711 aaPredicted RBP7.87□□□□□ -1.15
TTC28-208ENST00000612946 AMY1AP04745 511 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 NHLRC1Q6VVB1 395 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 OR13G1Q8NGZ3 307 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 SIGMAR1Q99720 223 aa7.87□□□□□ -1.15
TTC28-208ENST00000612946 FCMRO60667 390 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 SMIM13P0DJ93 91 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 OTX2P32243 289 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 CYB561D1Q8N8Q1 229 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 CD99L2Q8TCZ2 262 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 CACNA1HO95180 2353 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 NTHL1P78549 312 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 SPNS2Q8IVW8 549 aa7.86□□□□□ -1.15
TTC28-208ENST00000612946 C16orf70Q9BSU1 422 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms