RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 ADAT1Q9BUB4 502 aaKnown RBP11.52□□□□□ -0.56
TCF3-220ENST00000611869 HES7Q9BYE0 225 aa11.52□□□□□ -0.56
TCF3-220ENST00000611869 ESRP2Q9H6T0 727 aaKnown RBP11.52□□□□□ -0.56
TCF3-220ENST00000611869 IFNA10P01566 189 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 SOHLH1Q5JUK2 328 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 FNDC7Q5VTL7 733 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 DCAF12L2Q5VW00 463 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 FAM58AQ8N1B3 248 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 ZNF485Q8NCK3 441 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 SLC7A10Q9NS82 523 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 ZNF629Q9UEG4 869 aaPredicted RBP11.52□□□□□ -0.57
TCF3-220ENST00000611869 A0A1W2PNV4 684 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 HMSDA8MTL9 139 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 ASCL1P50553 236 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 PSG4Q00888 419 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 HIKESHIQ53FT3 197 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 SLC39A7Q92504 469 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 LPAR5Q9H1C0 372 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 RIMS4Q9H426 269 aaPredicted RBP11.52□□□□□ -0.57
TCF3-220ENST00000611869 PLEKHA2Q9HB19 425 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 RAB18Q9NP72 206 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 TMEM100Q9NV29 134 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 GFOD1Q9NXC2 390 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 VSIG4Q9Y279 399 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 THADAQ6YHU6 1953 aa11.52□□□□□ -0.57
TCF3-220ENST00000611869 PRRG2O14669 202 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 ADAM10O14672 748 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 ISG15P05161 165 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 OR5AC1P0C628 307 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 SPANXN5Q5MJ07 72 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 LYPD8Q6UX82 237 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 OR1S2Q8NGQ3 325 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 PRRX2Q99811 253 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 TTTY12Q9BZ98 90 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 DNAH12Q6ZR08 3092 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 POLEQ07864 2286 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 A0A0B4J293 547 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 J3QRE1 110 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 CST7O76096 145 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 HPNP05981 417 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 IAPPP10997 89 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 SSX9Q7RTT3 188 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 SLC25A42Q86VD7 318 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 NFAM1Q8NET5 270 aaPredicted RBP11.51□□□□□ -0.57
TCF3-220ENST00000611869 C20orf24Q9BUV8 137 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 OPA3Q9H6K4 179 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 AK3Q9UIJ7 227 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 CHCHD2Q9Y6H1 151 aaPredicted RBP11.51□□□□□ -0.57
TCF3-220ENST00000611869 A0A1W2PPV4 95 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 GPR31O00270 319 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 RAB31Q13636 194 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 PDLIM3Q53GG5 364 aaPredicted RBP11.51□□□□□ -0.57
TCF3-220ENST00000611869 C1orf100Q5SVJ3 147 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 GGNBP1Q5YKI7 109 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 SLC38A6Q8IZM9 456 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 OR5B12Q96R08 314 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 ERRFI1Q9UJM3 462 aaPredicted RBP11.51□□□□□ -0.57
TCF3-220ENST00000611869 OR13C7P0DN81 318 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 S100PP25815 95 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 CALCRP30988 508 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 RPL19P84098 196 aaKnown RBP11.51□□□□□ -0.57
TCF3-220ENST00000611869 TMEM255AQ5JRV8 349 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 FDX2Q6P4F2 183 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 TMEM251Q8N6I4 163 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 ZNF610Q8N9Z0 462 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 PTX4Q96A99 478 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 IL17BQ9UHF5 180 aa11.51□□□□□ -0.57
TCF3-220ENST00000611869 PCNTO95613 3336 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 NDUFB7P17568 137 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 CDCP2Q5VXM1 449 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 OR11H4Q8NGC9 324 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 POC1BQ8TC44 478 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 SRXN1Q9BYN0 137 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 HEYLQ9NQ87 328 aaPredicted RBP11.5□□□□□ -0.57
TCF3-220ENST00000611869 MKRN2OSH3BPM6 223 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 SP1P08047 785 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 ELLP55199 621 aaPredicted RBP11.5□□□□□ -0.57
TCF3-220ENST00000611869 BAXQ07812 192 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 ZNF260Q3ZCT1 412 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 SLC23A3Q6PIS1 610 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 WFDC8Q8IUA0 241 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 RFESDQ8TAC1 157 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 H1FXQ92522 213 aaKnown RBP11.5□□□□□ -0.57
TCF3-220ENST00000611869 PPP1R32Q7Z5V6 425 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 C17orf82Q86X59 251 aaPredicted RBP11.5□□□□□ -0.57
TCF3-220ENST00000611869 SKA3Q8IX90 412 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 OR4A16Q8NH70 328 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 SOX7Q9BT81 388 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 RCL1Q9Y2P8 373 aaKnown RBP11.5□□□□□ -0.57
TCF3-220ENST00000611869 PRELID3BQ9Y3B1 194 aa11.5□□□□□ -0.57
TCF3-220ENST00000611869 HELZP42694 1942 aaKnown RBP11.5□□□□□ -0.57
TCF3-220ENST00000611869 HEATR5AQ86XA9 2040 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 ARPC4-TTLL3A0A0A6YYG9 625 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 LNP1A1A4G5 178 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 CRHP06850 196 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 RFPL3SP0C7P2 107 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 TLE4Q04727 773 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 Q5BKY6 102 aa11.49□□□□□ -0.57
TCF3-220ENST00000611869 MRPS24Q96EL2 167 aaKnown RBP11.49□□□□□ -0.57
TCF3-220ENST00000611869 PLEKHA3Q9HB20 300 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms