RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 CALHM2Q9HA72 323 aa11.04□□□□□ -0.64
CTCFL-218ENST00000608440 NSG1A0A0A6YYJ2 146 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 IGHV2-70DA0A0C4DH43 119 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 C4orf51C9J302 202 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 C5orf67F2Z3F1 127 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 ERI3O43414 337 aaKnown RBP11.03□□□□□ -0.64
CTCFL-218ENST00000608440 TOMM40O96008 361 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 MEP1BQ16820 701 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 SP6Q3SY56 376 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 Q6ZN92 141 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 OR5H2Q8NGV7 314 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 PTPMT1Q8WUK0 201 aaPredicted RBP11.03□□□□□ -0.64
CTCFL-218ENST00000608440 RPUSD4Q96CM3 377 aaKnown RBP11.03□□□□□ -0.64
CTCFL-218ENST00000608440 BOD1Q96IK1 185 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 VN1R1Q9GZP7 353 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 ZNF703Q9H7S9 590 aaPredicted RBP11.03□□□□□ -0.64
CTCFL-218ENST00000608440 OR6C3Q9NZP0 311 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 B9D1Q9UPM9 204 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 CCL26Q9Y258 94 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 TRAV39A0A0B4J263 110 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 A0A1W2PNV4 684 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 FGF17O60258 216 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 LDB3O75112 727 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 MLF1P58340 268 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 RUNX1Q01196 453 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 GPM6BQ13491 265 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 POM121L1PQ3SYA9 428 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 PRAMEF20Q5VT98 475 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 OR4N5Q8IXE1 308 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 DCAF4L2Q8NA75 395 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 OR5L1Q8NGL2 311 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 ABHD3Q8WU67 409 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 ALG14Q96F25 216 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 OR5B12Q96R08 314 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 OR6C1Q96RD1 312 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 SF3B5Q9BWJ5 86 aaKnown RBP11.03□□□□□ -0.64
CTCFL-218ENST00000608440 LSM7Q9UK45 103 aaKnown RBP11.03□□□□□ -0.64
CTCFL-218ENST00000608440 CLEC4EQ9ULY5 219 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 TRANK1O15050 2925 aa11.03□□□□□ -0.64
CTCFL-218ENST00000608440 OBSL1O75147 1896 aa11.02□□□□□ -0.64
CTCFL-218ENST00000608440 NUDT21O43809 227 aaKnown RBP11.02□□□□□ -0.64
CTCFL-218ENST00000608440 CTSVO60911 334 aa11.02□□□□□ -0.64
CTCFL-218ENST00000608440 LILRA1O75019 489 aa11.02□□□□□ -0.64
CTCFL-218ENST00000608440 DBHP09172 617 aa11.02□□□□□ -0.64
CTCFL-218ENST00000608440 ZNF43P17038 809 aa11.02□□□□□ -0.64
CTCFL-218ENST00000608440 GCH1P30793 250 aa11.02□□□□□ -0.64
CTCFL-218ENST00000608440 PRLHRP49683 370 aa11.02□□□□□ -0.64
CTCFL-218ENST00000608440 FAM3BP58499 235 aaPredicted RBP11.02□□□□□ -0.64
CTCFL-218ENST00000608440 ACTL10Q5JWF8 245 aa11.02□□□□□ -0.64
CTCFL-218ENST00000608440 CFAP161Q6P656 301 aa11.02□□□□□ -0.64
CTCFL-218ENST00000608440 DPY19L2P2Q6ZN68 376 aa11.02□□□□□ -0.64
CTCFL-218ENST00000608440 Q6ZNB5 142 aa11.02□□□□□ -0.64
CTCFL-218ENST00000608440 MARCH3Q86UD3 253 aa11.02□□□□□ -0.64
CTCFL-218ENST00000608440 DTWD2Q8NBA8 298 aa11.02□□□□□ -0.64
CTCFL-218ENST00000608440 OR56B2PQ8NGI1 322 aa11.02□□□□□ -0.64
CTCFL-218ENST00000608440 TUBD1Q9UJT1 453 aa11.02□□□□□ -0.64
CTCFL-218ENST00000608440 HCFC2Q9Y5Z7 792 aa11.02□□□□□ -0.64
CTCFL-218ENST00000608440 A0A0B4J2E0 115 aa11.02□□□□□ -0.65
CTCFL-218ENST00000608440 A0A1B0GX12 115 aa11.02□□□□□ -0.65
CTCFL-218ENST00000608440 YPEL1O60688 119 aa11.02□□□□□ -0.65
CTCFL-218ENST00000608440 HLA-DQA2P01906 255 aa11.02□□□□□ -0.65
CTCFL-218ENST00000608440 HNRNPA3P51991 378 aaKnown RBP11.02□□□□□ -0.65
CTCFL-218ENST00000608440 PSG6Q00889 435 aa11.02□□□□□ -0.65
CTCFL-218ENST00000608440 MFGE8Q08431 387 aaPredicted RBP11.02□□□□□ -0.65
CTCFL-218ENST00000608440 ACOT6Q3I5F7 207 aaPredicted RBP11.02□□□□□ -0.65
CTCFL-218ENST00000608440 CPEB2Q7Z5Q1 589 aaKnown RBP11.02□□□□□ -0.65
CTCFL-218ENST00000608440 OR51G1Q8NGK1 321 aa11.02□□□□□ -0.65
CTCFL-218ENST00000608440 THRSPQ92748 146 aa11.02□□□□□ -0.65
CTCFL-218ENST00000608440 YPEL2Q96QA6 119 aa11.02□□□□□ -0.65
CTCFL-218ENST00000608440 RASL10BQ96S79 203 aa11.02□□□□□ -0.65
CTCFL-218ENST00000608440 PATZ1Q9HBE1 687 aaKnown RBP11.02□□□□□ -0.65
CTCFL-218ENST00000608440 FIGNL2A6NMB9 653 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 DBIP07108 87 aaKnown RBP11.01□□□□□ -0.65
CTCFL-218ENST00000608440 PSG1P11464 419 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 AMY2BP19961 511 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 EXOSC7Q15024 291 aaKnown RBP11.01□□□□□ -0.65
CTCFL-218ENST00000608440 C9orf40Q8IXQ3 194 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 ZNF619Q8N2I2 560 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 RSPRY1Q96DX4 576 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 ZNF845Q96IR2 970 aaPredicted RBP11.01□□□□□ -0.65
CTCFL-218ENST00000608440 SCGB3A2Q96PL1 93 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 ZNF780BQ9Y6R6 833 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 EML5Q05BV3 1969 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 IGHV2OR16-5A0A0B4J2B6 119 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 LOC102723971A0A1B0GUV8 181 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 GRIFINA4D1Z8 144 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 MAP1LC3B2A6NCE7 125 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 H7BYZ3 331 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 H2BFMP0C1H6 154 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 TMEM225BP0DP42 221 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 FAM180AQ6UWF9 173 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 H1FOOQ8IZA3 346 aaPredicted RBP11.01□□□□□ -0.65
CTCFL-218ENST00000608440 GABRG3Q99928 467 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 HSPB9Q9BQS6 159 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 MAP1LC3BQ9GZQ8 125 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 CTDSP1Q9GZU7 261 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 ZNF160Q9HCG1 818 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 HSPB7Q9UBY9 170 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 B3GALT5Q9Y2C3 310 aa11.01□□□□□ -0.65
CTCFL-218ENST00000608440 FANCMQ8IYD8 2048 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms