RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ZNF154Q13106 437 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 ZNF782Q6ZMW2 699 aaPredicted RBP18.37■□□□□ 0.53
USP6NL-204ENST00000606752 Q6ZR03 302 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 BATF2Q8N1L9 274 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 SCCPDHQ8NBX0 429 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 OR4S1Q8NGB4 309 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 OR10AD1Q8NGE0 317 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 TMEM171Q8WVE6 324 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 CYYR1Q96J86 154 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 CXXC4Q9H2H0 198 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 RHOFQ9HBH0 211 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 DUSP13Q9UII6 198 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 A0A0B4J293 547 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 NAT1P18440 290 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 RAG2P55895 527 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 CHAC2Q8WUX2 184 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 FBXW5Q969U6 566 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 WFIKKN1Q96NZ8 548 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 PLK3Q9H4B4 646 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 ZNF581Q9P0T4 197 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 POU2F3Q9UKI9 436 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 POLDIP2Q9Y2S7 368 aa18.37■□□□□ 0.53
USP6NL-204ENST00000606752 DPRXA6NFQ7 191 aa18.36■□□□□ 0.53
USP6NL-204ENST00000606752 RHBDL1O75783 438 aa18.36■□□□□ 0.53
USP6NL-204ENST00000606752 DHFRP00374 187 aa18.36■□□□□ 0.53
USP6NL-204ENST00000606752 H2AFB2P0C5Z0 115 aa18.36■□□□□ 0.53
USP6NL-204ENST00000606752 RAB25P57735 213 aa18.36■□□□□ 0.53
USP6NL-204ENST00000606752 ADORA2A-AS1P86434 159 aa18.36■□□□□ 0.53
USP6NL-204ENST00000606752 LRP11Q86VZ4 500 aa18.36■□□□□ 0.53
USP6NL-204ENST00000606752 NUP37Q8NFH4 326 aa18.36■□□□□ 0.53
USP6NL-204ENST00000606752 OR56B4Q8NH76 319 aa18.36■□□□□ 0.53
USP6NL-204ENST00000606752 LILRB4Q8NHJ6 448 aa18.36■□□□□ 0.53
USP6NL-204ENST00000606752 FAAP24Q9BTP7 215 aa18.36■□□□□ 0.53
USP6NL-204ENST00000606752 MSL2Q9HCI7 577 aa18.36■□□□□ 0.53
USP6NL-204ENST00000606752 ACACBO00763 2458 aa18.36■□□□□ 0.53
USP6NL-204ENST00000606752 ITPR1Q14643 2758 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 PDCD6O75340 191 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 OR7C1O76099 320 aaPredicted RBP18.35■□□□□ 0.53
USP6NL-204ENST00000606752 TBPP20226 339 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 FUT3P21217 361 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 KLF3P57682 345 aaPredicted RBP18.35■□□□□ 0.53
USP6NL-204ENST00000606752 MEF2DQ14814 521 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 DAZAP2Q15038 168 aaPredicted RBP18.35■□□□□ 0.53
USP6NL-204ENST00000606752 OR52W1Q6IF63 320 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 VHLLQ6RSH7 139 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 PIAS4Q8N2W9 510 aaPredicted RBP18.35■□□□□ 0.53
USP6NL-204ENST00000606752 OR51S1Q8NGJ8 323 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 EMG1Q92979 244 aaKnown RBP18.35■□□□□ 0.53
USP6NL-204ENST00000606752 HS3ST6Q96QI5 342 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 TINAGL1Q9GZM7 467 aaPredicted RBP18.35■□□□□ 0.53
USP6NL-204ENST00000606752 NGBQ9NPG2 151 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 IGLV3-9A0A075B6K5 115 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 M0QYG6 137 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 NDUFB6O95139 128 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 GRPP07492 148 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 PDCD1Q15116 288 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 ZNF488Q96MN9 340 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 C20orf85Q9H1P6 137 aa18.35■□□□□ 0.53
USP6NL-204ENST00000606752 COL6A6A6NMZ7 2263 aa18.34■□□□□ 0.53
USP6NL-204ENST00000606752 FAM90A27PA6NNH2 459 aa18.34■□□□□ 0.53
USP6NL-204ENST00000606752 CDIPTO14735 213 aa18.34■□□□□ 0.53
USP6NL-204ENST00000606752 TPD52L2O43399 206 aaKnown RBP18.34■□□□□ 0.53
USP6NL-204ENST00000606752 PMELP40967 661 aa18.34■□□□□ 0.53
USP6NL-204ENST00000606752 SELENOVP59797 346 aa18.34■□□□□ 0.53
USP6NL-204ENST00000606752 MZT1Q08AG7 82 aa18.34■□□□□ 0.53
USP6NL-204ENST00000606752 MPV17LQ2QL34 196 aa18.34■□□□□ 0.53
USP6NL-204ENST00000606752 RNASE10Q5GAN6 216 aaKnown RBP18.34■□□□□ 0.53
USP6NL-204ENST00000606752 ZNF554Q86TJ5 538 aa18.34■□□□□ 0.53
USP6NL-204ENST00000606752 HOGA1Q86XE5 327 aa18.34■□□□□ 0.53
USP6NL-204ENST00000606752 Q8IYB0 196 aa18.34■□□□□ 0.53
USP6NL-204ENST00000606752 FAM58AQ8N1B3 248 aa18.34■□□□□ 0.53
USP6NL-204ENST00000606752 SNAPC3Q92966 411 aa18.34■□□□□ 0.53
USP6NL-204ENST00000606752 RNASE6Q93091 150 aaKnown RBP18.34■□□□□ 0.53
USP6NL-204ENST00000606752 SULT4A1Q9BR01 284 aa18.34■□□□□ 0.53
USP6NL-204ENST00000606752 PLEKHA6Q9Y2H5 1048 aa18.34■□□□□ 0.53
USP6NL-204ENST00000606752 ALG5Q9Y673 324 aa18.34■□□□□ 0.53
USP6NL-204ENST00000606752 NBASA2RRP1 2371 aa18.34■□□□□ 0.53
USP6NL-204ENST00000606752 F5H5P2 479 aa18.33■□□□□ 0.53
USP6NL-204ENST00000606752 ABCD4O14678 606 aa18.33■□□□□ 0.53
USP6NL-204ENST00000606752 AMY2AP04746 511 aa18.33■□□□□ 0.53
USP6NL-204ENST00000606752 ACAA1P09110 424 aaPredicted RBP18.33■□□□□ 0.53
USP6NL-204ENST00000606752 PRKACAP17612 351 aa18.33■□□□□ 0.53
USP6NL-204ENST00000606752 MAB21L1Q13394 359 aa18.33■□□□□ 0.53
USP6NL-204ENST00000606752 RBMS2Q15434 407 aaKnown RBP18.33■□□□□ 0.53
USP6NL-204ENST00000606752 LINC00596Q86U02 117 aa18.33■□□□□ 0.53
USP6NL-204ENST00000606752 ST6GALNAC5Q9BVH7 336 aa18.33■□□□□ 0.53
USP6NL-204ENST00000606752 NPDC1Q9NQX5 325 aaPredicted RBP18.33■□□□□ 0.53
USP6NL-204ENST00000606752 AK3Q9UIJ7 227 aa18.33■□□□□ 0.53
USP6NL-204ENST00000606752 H3BUI4 141 aa18.33■□□□□ 0.52
USP6NL-204ENST00000606752 ZNF735P0CB33 412 aa18.33■□□□□ 0.52
USP6NL-204ENST00000606752 SNU13P55769 128 aaKnown RBP18.33■□□□□ 0.52
USP6NL-204ENST00000606752 ERVK11-1P61568 191 aa18.33■□□□□ 0.52
USP6NL-204ENST00000606752 MRPS15P82914 257 aaKnown RBP18.33■□□□□ 0.52
USP6NL-204ENST00000606752 BSPH1Q075Z2 132 aa18.33■□□□□ 0.52
USP6NL-204ENST00000606752 ATAD3CQ5T2N8 411 aa18.33■□□□□ 0.52
USP6NL-204ENST00000606752 BPIFB2Q8N4F0 458 aa18.33■□□□□ 0.52
USP6NL-204ENST00000606752 OR4K15Q8NH41 348 aa18.33■□□□□ 0.52
USP6NL-204ENST00000606752 CMSS1Q9BQ75 279 aaKnown RBP18.33■□□□□ 0.52
USP6NL-204ENST00000606752 SYT3Q9BQG1 590 aa18.33■□□□□ 0.52
USP6NL-204ENST00000606752 IL36RNQ9UBH0 155 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms