RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 HSD17B13Q7Z5P4 300 aaPredicted RBP10.1□□□□□ -0.79
VRK3-223ENST00000601341 TMED4Q7Z7H5 227 aa10.1□□□□□ -0.79
VRK3-223ENST00000601341 ZNF546Q86UE3 836 aa10.1□□□□□ -0.79
VRK3-223ENST00000601341 MDP1Q86V88 176 aa10.1□□□□□ -0.79
VRK3-223ENST00000601341 HOGA1Q86XE5 327 aa10.1□□□□□ -0.79
VRK3-223ENST00000601341 CHST4Q8NCG5 386 aa10.1□□□□□ -0.79
VRK3-223ENST00000601341 OR14K1Q8NGZ2 314 aa10.1□□□□□ -0.79
VRK3-223ENST00000601341 TMEM59Q9BXS4 323 aa10.1□□□□□ -0.79
VRK3-223ENST00000601341 OBP2BQ9NPH6 170 aa10.1□□□□□ -0.79
VRK3-223ENST00000601341 GPR84Q9NQS5 396 aa10.1□□□□□ -0.79
VRK3-223ENST00000601341 PFDN2Q9UHV9 154 aa10.1□□□□□ -0.79
VRK3-223ENST00000601341 VSIG4Q9Y279 399 aa10.1□□□□□ -0.79
VRK3-223ENST00000601341 INTS1Q8N201 2190 aaKnown RBP10.1□□□□□ -0.79
VRK3-223ENST00000601341 TRAV14DV4A0A0A6YYC5 116 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 C9orf170A2RU37 121 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 A8MXK9 166 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 ATXN7O15265 892 aaPredicted RBP10.09□□□□□ -0.79
VRK3-223ENST00000601341 CDC14BO60729 498 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 SIX6O95475 246 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 LCATP04180 440 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 SERPINA5P05154 406 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 NAT2P11245 290 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 IL32P24001 234 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 APLNRP35414 380 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 SORDQ00796 357 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 TSC22D1Q15714 1073 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 FAM209AQ5JX71 171 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 ZNF660Q6AZW8 331 aaPredicted RBP10.09□□□□□ -0.79
VRK3-223ENST00000601341 C11orf87Q6NUJ2 197 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 OVCH2Q7RTZ1 564 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 ZNF101Q8IZC7 436 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 TMEM185AQ8NFB2 350 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 TERB2Q8NHR7 220 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 FBXW5Q969U6 566 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 RAB3CQ96E17 227 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 REG4Q9BYZ8 158 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 SELENOIQ9C0D9 397 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 OR10A2Q9H208 303 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 ZMAT3Q9HA38 289 aaKnown RBP10.09□□□□□ -0.79
VRK3-223ENST00000601341 SDHAF2Q9NX18 166 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 GLS2Q9UI32 602 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 TNFSF18Q9UNG2 199 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 KCNK7Q9Y2U2 307 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 NOP16Q9Y3C1 178 aaKnown RBP10.09□□□□□ -0.79
VRK3-223ENST00000601341 V9GYS6 101 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 LOC100509620A0A075B734 347 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 C5orf49A4QMS7 147 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 OR5H1A6NKK0 313 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 DBX1A6NMT0 343 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 CCL21O00585 134 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 MFNGO00587 321 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 MTRF1O75570 445 aaKnown RBP10.09□□□□□ -0.79
VRK3-223ENST00000601341 DHRS3O75911 302 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 HRH1P35367 487 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 IL13RA1P78552 427 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 TMEM128Q5BJH2 165 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 GLIPR1L1Q6UWM5 242 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 COMMD2Q86X83 199 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 PDZD9Q8IXQ8 264 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 WDR31Q8NA23 367 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 OR4S1Q8NGB4 309 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 MRGPRFQ96AM1 343 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 WDR89Q96FK6 387 aaPredicted RBP10.09□□□□□ -0.79
VRK3-223ENST00000601341 CPNE2Q96FN4 548 aaPredicted RBP10.09□□□□□ -0.79
VRK3-223ENST00000601341 POM121L2Q96KW2 1035 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 ELOVL5Q9NYP7 299 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 ZNF319Q9P2F9 582 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 AMDHD2Q9Y303 409 aa10.09□□□□□ -0.79
VRK3-223ENST00000601341 CACNA1BQ00975 2339 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 SERPINE3A8MV23 424 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 SSX5O60225 188 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 CBR1P16152 277 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 CCNOP22674 350 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 ECI1P42126 302 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 TAS2R46P59540 309 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 HGFACQ04756 655 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 SURF2Q15527 256 aaPredicted RBP10.08□□□□□ -0.8
VRK3-223ENST00000601341 GFOD2Q3B7J2 385 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 ACOT7LQ6ZUV0 252 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 TMEM17Q86X19 198 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 SLC30A7Q8NEW0 376 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 OR4K15Q8NH41 348 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 ZNF75AQ96N20 296 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 USB1Q9BQ65 265 aaKnown RBP10.08□□□□□ -0.8
VRK3-223ENST00000601341 TM2D1Q9BX74 207 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 C1QTNF5Q9BXJ0 243 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 NMES1Q9C002 83 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 RGCCQ9H4X1 137 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 JKAMPQ9P055 326 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 ZNF391Q9UJN7 358 aa10.08□□□□□ -0.8
VRK3-223ENST00000601341 SHANK1Q9Y566 2161 aa10.07□□□□□ -0.8
VRK3-223ENST00000601341 TRBV6-7A0A0A0MS04 114 aa10.07□□□□□ -0.8
VRK3-223ENST00000601341 A0A1W2PR80 420 aa10.07□□□□□ -0.8
VRK3-223ENST00000601341 BET1O15155 118 aa10.07□□□□□ -0.8
VRK3-223ENST00000601341 BCL2L11O43521 198 aa10.07□□□□□ -0.8
VRK3-223ENST00000601341 HCKP08631 526 aa10.07□□□□□ -0.8
VRK3-223ENST00000601341 FGF2P09038 288 aa10.07□□□□□ -0.8
VRK3-223ENST00000601341 GNB3P16520 340 aa10.07□□□□□ -0.8
VRK3-223ENST00000601341 ZNF14P17017 642 aaPredicted RBP10.07□□□□□ -0.8
VRK3-223ENST00000601341 MRPL49Q13405 166 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms