RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 ZNF480Q8WV37 535 aa8.66□□□□□ -1.02
NFKB1-212ENST00000600343 OR51I2Q9H344 312 aa8.66□□□□□ -1.02
NFKB1-212ENST00000600343 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.65□□□□□ -1.02
NFKB1-212ENST00000600343 GLOD5A6NK44 160 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 OR2AG2A6NM03 316 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 ZNF891A8MT65 544 aaPredicted RBP8.65□□□□□ -1.02
NFKB1-212ENST00000600343 DIRC3C9JPN6 131 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 SPINT1O43278 529 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 SLC25A17O43808 307 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 ZIC2O95409 532 aaPredicted RBP8.65□□□□□ -1.02
NFKB1-212ENST00000600343 CDS2O95674 445 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 GABRA3P34903 492 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 VASPP50552 380 aaPredicted RBP8.65□□□□□ -1.02
NFKB1-212ENST00000600343 KRTDAPP60985 99 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 ZNF266Q14584 549 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 TMEM225Q6GV28 225 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 C1orf174Q8IYL3 243 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 WDR34Q96EX3 536 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 SAMD10Q9BYL1 202 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 ZNF703Q9H7S9 590 aaPredicted RBP8.65□□□□□ -1.02
NFKB1-212ENST00000600343 CALHM2Q9HA72 323 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 FBRSQ9HAH7 460 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 G6PC2Q9NQR9 355 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 MRPS16Q9Y3D3 137 aaKnown RBP8.65□□□□□ -1.02
NFKB1-212ENST00000600343 TMEM202A6NGA9 273 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 FAM166BA8MTA8 275 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 TMPRSS11DO60235 418 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 ONECUT2O95948 504 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 MSR1P21757 451 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 BSGP35613 385 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 MPLP40238 635 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 KLHDC1Q8N7A1 406 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 MRPL24Q96A35 216 aaKnown RBP8.65□□□□□ -1.02
NFKB1-212ENST00000600343 ZNF160Q9HCG1 818 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 TAS2R4Q9NYW5 299 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 NAT8Q9UHE5 227 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 PRSS50Q9UI38 385 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 COLQQ9Y215 455 aaPredicted RBP8.65□□□□□ -1.02
NFKB1-212ENST00000600343 SPTBP11277 2137 aa8.65□□□□□ -1.02
NFKB1-212ENST00000600343 ABHD16AO95870 558 aa8.65□□□□□ -1.03
NFKB1-212ENST00000600343 ALOX5APP20292 161 aa8.65□□□□□ -1.03
NFKB1-212ENST00000600343 EIPR1Q53HC9 387 aa8.65□□□□□ -1.03
NFKB1-212ENST00000600343 RFLNAQ6ZTI6 216 aa8.65□□□□□ -1.03
NFKB1-212ENST00000600343 ATP6V0BQ99437 205 aa8.65□□□□□ -1.03
NFKB1-212ENST00000600343 RBPJLQ9UBG7 517 aa8.65□□□□□ -1.03
NFKB1-212ENST00000600343 CDC42EP3Q9UKI2 254 aa8.65□□□□□ -1.03
NFKB1-212ENST00000600343 DHDHQ9UQ10 334 aa8.65□□□□□ -1.03
NFKB1-212ENST00000600343 DENND4CQ5VZ89 1909 aa8.65□□□□□ -1.03
NFKB1-212ENST00000600343 NDUFB2O95178 105 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 BSXQ3C1V8 233 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 TMEM64Q6YI46 380 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 OR1N2Q8NGR9 330 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 RHBDD1Q8TEB9 315 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 PAAF1Q9BRP4 392 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 PARLQ9H300 379 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 MRPL27Q9P0M9 148 aaKnown RBP8.64□□□□□ -1.03
NFKB1-212ENST00000600343 DOCK8Q8NF50 2099 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 IGLV3-16A0A075B6K0 115 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 GRIFINA4D1Z8 144 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 RBFOX2O43251 390 aaKnown RBP eCLIP8.64□□□□□ -1.03
NFKB1-212ENST00000600343 EFEMP2O95967 443 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 CDKN3Q16667 212 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 WDR38Q5JTN6 314 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 AMMECR1LQ6DCA0 310 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 SLC38A9Q8NBW4 561 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 OR5H2Q8NGV7 314 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 SMIM7Q9BQ49 75 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 CCDC3Q9BQI4 270 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 NUDT16L1Q9BRJ7 211 aaKnown RBP8.64□□□□□ -1.03
NFKB1-212ENST00000600343 CISD1Q9NZ45 108 aaKnown RBP8.64□□□□□ -1.03
NFKB1-212ENST00000600343 CEACAM18A8MTB9 384 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 G3V3Y1 287 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 TYMSP04818 313 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 BCL2P10415 239 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 CRYBA4P53673 196 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 SNRPD1P62314 119 aaKnown RBP8.64□□□□□ -1.03
NFKB1-212ENST00000600343 RTP5Q14D33 572 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 ASPHD2Q6ICH7 369 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 DNM1P34Q6PK57 102 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 BHLHA15Q7RTS1 189 aaPredicted RBP8.64□□□□□ -1.03
NFKB1-212ENST00000600343 C11orf40Q8WZ69 217 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 C4orf45Q96LM5 186 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 DOCK3Q8IZD9 2030 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 VSTM5A8MXK1 200 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 TIAF1O95411 115 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 ZNF117Q03924 483 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 MFGE8Q08431 387 aaPredicted RBP8.64□□□□□ -1.03
NFKB1-212ENST00000600343 MSMO1Q15800 293 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 VAX1Q5SQQ9 334 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 KCNIP4Q6PIL6 250 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 LILRA3Q8N6C8 439 aaPredicted RBP8.64□□□□□ -1.03
NFKB1-212ENST00000600343 NUP43Q8NFH3 380 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 OR6N2Q8NGY6 317 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 RASD2Q96D21 266 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 B3GALT5Q9Y2C3 310 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 INSL5Q9Y5Q6 135 aa8.64□□□□□ -1.03
NFKB1-212ENST00000600343 IGLC7A0M8Q6 106 aa8.63□□□□□ -1.03
NFKB1-212ENST00000600343 NPIPB15A6NHN6 443 aaPredicted RBP8.63□□□□□ -1.03
NFKB1-212ENST00000600343 RAB29O14966 203 aa8.63□□□□□ -1.03
NFKB1-212ENST00000600343 MT-CO2P00403 227 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms