RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 DCTN5Q9BTE1 182 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 DUSP21Q9H596 190 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 DUX4Q9UBX2 424 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 OR14J1Q9UGF5 321 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 BLOC1S6Q9UL45 172 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 RRP15Q9Y3B9 282 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 MAB21L2Q9Y586 359 aa14.31□□□□□ -0.12
SHKBP1-212ENST00000596163 RGS10O43665 173 aa14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 TOX4O94842 621 aa14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 INMTO95050 263 aa14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 BPIFB3P59826 476 aa14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 SLC35A2P78381 396 aa14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 ACSM1Q08AH1 577 aa14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 KISS1Q15726 138 aa14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 Q499Y3 187 aa14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 RBM48Q5RL73 367 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 CD177Q8N6Q3 437 aa14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 ZSCAN4Q8NAM6 433 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 ZNRF1Q8ND25 227 aa14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 LY6G5BQ8NDX9 201 aa14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 TBC1D15Q8TC07 691 aa14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 EMG1Q92979 244 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 SUCNR1Q9BXA5 334 aa14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 FAM234AQ9H0X4 552 aa14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 SEBOXQ9HB31 216 aaPredicted RBP14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 CKLFQ9UBR5 152 aa14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 KPTNQ9Y664 436 aa14.3□□□□□ -0.12
SHKBP1-212ENST00000596163 TRBV23-1A0A0A0MS06 115 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 TRBV5-5A0A0J9YX44 114 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 ALDOBP05062 364 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 CELP19835 753 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 ARF6P62330 175 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 PDCD1Q15116 288 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 ZNF529Q6P280 563 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 FAM58AQ8N1B3 248 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 BATF2Q8N1L9 274 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 ZFP41Q8N8Y5 198 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 C8orf46Q8TAG6 207 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 TMEM158Q8WZ71 300 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 RFT1Q96AA3 541 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 WDFY2Q96P53 400 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 JMJD8Q96S16 334 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 GPER1Q99527 375 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 PCGF1Q9BSM1 259 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 MS4A7Q9GZW8 240 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 TAS2R4Q9NYW5 299 aa14.29□□□□□ -0.12
SHKBP1-212ENST00000596163 A0A1W2PPH5 198 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 A0A1W2PQ09 198 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 SPRY1O43609 319 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 FCN3O75636 299 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 TFF1P04155 84 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 TMEM225BP0DP42 221 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 SELLP14151 372 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 CRHBPP24387 322 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 BMXP51813 675 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 BLMHQ13867 455 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 SPHARQ15513 63 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 MED22Q15528 200 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 SPIN3Q5JUX0 258 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 GPR157Q5UAW9 335 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 RBMS3Q6XE24 437 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 USP43Q70EL4 1123 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 SATL1Q86VE3 508 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 MS4A15Q8N5U1 240 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 KIR3DL3Q8N743 410 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 OR5D13Q8NGL4 314 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 PGLYRP3Q96LB9 341 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 SPACA5Q96QH8 159 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 ZNF184Q99676 751 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 CCDC90BQ9GZT6 254 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 TMEM138Q9NPI0 162 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 ONECUT1Q9UBC0 465 aa14.28□□□□□ -0.12
SHKBP1-212ENST00000596163 WNK2Q9Y3S1 2297 aa14.27□□□□□ -0.12
SHKBP1-212ENST00000596163 PNMA8CA0A1B0GUJ8 204 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 F8VVB4 439 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 F8VWA3 439 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 GPX5O75715 221 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 KDM4BO94953 1096 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 PRKACAP17612 351 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 BCL3P20749 454 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 MAPK3P27361 379 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 BDKRB2P30411 391 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 NPBWR2P48146 333 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 GPR50Q13585 617 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 IRF3Q14653 427 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 KLF17Q5JT82 389 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 C1orf122Q6ZSJ8 110 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 PRSS48Q7RTY5 328 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 FGFRL1Q8N441 504 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 OR5D18Q8NGL1 313 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 PPP1R35Q8TAP8 253 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 HMG20AQ9NP66 347 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 RBFOX1Q9NWB1 397 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 PAK1IP1Q9NWT1 392 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 ARHGAP32A7KAX9 2087 aa14.27□□□□□ -0.13
SHKBP1-212ENST00000596163 K7N7A8 449 aa14.26□□□□□ -0.13
SHKBP1-212ENST00000596163 SH2D1BO14796 132 aa14.26□□□□□ -0.13
SHKBP1-212ENST00000596163 ANGPTL7O43827 346 aa14.26□□□□□ -0.13
SHKBP1-212ENST00000596163 HAND1O96004 215 aa14.26□□□□□ -0.13
SHKBP1-212ENST00000596163 TK1P04183 234 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms