RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 GDPD3Q7L5L3 318 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 C16orf82Q7Z2V1 217 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 TMEM179BQ7Z7N9 219 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 OR4P4Q8NGL7 312 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 NDNFQ8TB73 568 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 TTTY10Q9BZA0 68 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 FAM107BQ9H098 131 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 LIN7BQ9HAP6 207 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 NDE1Q9NXR1 346 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 LINC00312Q9Y6C7 94 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 SESN1Q9Y6P5 492 aa7.95□□□□□ -1.14
LIG1-209ENST00000596104 hADV38S2A0JD32 116 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 A6NIN4 97 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 DHRS7CA6NNS2 312 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 E9PQ18 207 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 LOC110117498-PIK3R3F6TDL0 507 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 E2F6O75461 281 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 DNAJC8O75937 253 aaPredicted RBP7.94□□□□□ -1.14
LIG1-209ENST00000596104 OSMP13725 252 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 CD24P25063 80 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 HTR1DP28221 377 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 EDDM3AQ14507 147 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 TMEM236Q5W0B7 351 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 DHFR2Q86XF0 187 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 MRPL41Q8IXM3 137 aaKnown RBP7.94□□□□□ -1.14
LIG1-209ENST00000596104 ELMOD2Q8IZ81 293 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 ZNF676Q8N7Q3 588 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 TPRX1Q8N7U7 411 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 OR4X2Q8NGF9 303 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 OR52N4Q8NGI2 321 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 ASB17Q8WXJ9 295 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 AKR1E2Q96JD6 320 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 SNX22Q96L94 193 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 CEP19Q96LK0 163 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 CLEC7AQ9BXN2 247 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 TMEM133Q9H2Q1 129 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 MOB1AQ9H8S9 216 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 SEBOXQ9HB31 216 aaPredicted RBP7.94□□□□□ -1.14
LIG1-209ENST00000596104 SLC25A19Q9HC21 320 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 MTCH1Q9NZJ7 389 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.94□□□□□ -1.14
LIG1-209ENST00000596104 DPM3Q9P2X0 92 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 TMEM14AQ9Y6G1 99 aa7.94□□□□□ -1.14
LIG1-209ENST00000596104 IGKV1-27A0A075B6S5 117 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 SH2D7A6NKC9 451 aaPredicted RBP7.93□□□□□ -1.14
LIG1-209ENST00000596104 H3BUI4 141 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 MAGEB4O15481 346 aaPredicted RBP7.93□□□□□ -1.14
LIG1-209ENST00000596104 PSPNO60542 156 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 OR2F2O95006 317 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 CLIC3O95833 236 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 CST1P01037 141 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 IGHA1P01876 353 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 RAP2AP10114 183 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 CCL1P22362 96 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 ESRRGP62508 458 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 IL18R1Q13478 541 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 TRIM25Q14258 630 aaKnown RBP7.93□□□□□ -1.14
LIG1-209ENST00000596104 ABCA11PQ4W5N1 156 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 HSP90B2PQ58FF3 399 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 BAIAP2L2Q6UXY1 529 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 ZBTB49Q6ZSB9 765 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 ADGRG5Q8IZF4 528 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 HS3ST5Q8IZT8 346 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 TRMT10AQ8TBZ6 339 aaKnown RBP7.93□□□□□ -1.14
LIG1-209ENST00000596104 RBM14Q96PK6 669 aaKnown RBP7.93□□□□□ -1.14
LIG1-209ENST00000596104 APOL4Q9BPW4 351 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 SLC25A33Q9BSK2 321 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 CHID1Q9BWS9 393 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 CADM1Q9BY67 442 aaKnown RBP7.93□□□□□ -1.14
LIG1-209ENST00000596104 GPR61Q9BZJ8 451 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 MED4Q9NPJ6 270 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 IL36RNQ9UBH0 155 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 OR52A1Q9UKL2 312 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 IKZF2Q9UKS7 526 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.93□□□□□ -1.14
LIG1-209ENST00000596104 HHLA2Q9UM44 414 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 R4GMQ9 66 aa7.93□□□□□ -1.14
LIG1-209ENST00000596104 FAM230AA0A1W2PPH8 454 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 HAND1O96004 215 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 IGLV1-47P01700 117 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 BRS3P32247 399 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 THBS3P49746 956 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 BDH1Q02338 343 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 ZNF91Q05481 1191 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 UBE2V2Q15819 145 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 GRK1Q15835 563 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 KHDC1LQ5JSQ8 128 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 BCL2L15Q5TBC7 163 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 ZNF322Q6U7Q0 402 aaPredicted RBP7.92□□□□□ -1.14
LIG1-209ENST00000596104 PLEKHG7Q6ZR37 379 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 ARHGAP24Q8N264 748 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 ABHD12Q8N2K0 398 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 OSR2Q8N2R0 312 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 BCAS4Q8TDM0 211 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 CAPSLQ8WWF8 208 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 DPF1Q92782 380 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 SLAMF9Q96A28 289 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 CHST6Q9GZX3 395 aa7.92□□□□□ -1.14
LIG1-209ENST00000596104 MRM2Q9UI43 246 aaKnown RBP7.92□□□□□ -1.14
LIG1-209ENST00000596104 GTF2A1LQ9UNN4 478 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms