RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 ASCC1Q8N9N2 400 aaKnown RBP8.55□□□□□ -1.04
USE1-203ENST00000593597 ITFG2Q969R8 447 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 UTP4Q969X6 686 aaKnown RBP8.55□□□□□ -1.04
USE1-203ENST00000593597 SLAMF9Q96A28 289 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 R3HDM4Q96D70 268 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 PKIBQ9C010 78 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 MOB1AQ9H8S9 216 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 PAPOLBQ9NRJ5 636 aaKnown RBP8.55□□□□□ -1.04
USE1-203ENST00000593597 GTF2A1LQ9UNN4 478 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 POLDIP2Q9Y2S7 368 aa8.55□□□□□ -1.04
USE1-203ENST00000593597 FAM230AA0A1W2PPH8 454 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 ZAR1LA6NP61 321 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 FAM90A22PA8MWA6 464 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 PSPNO60542 156 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 INMTO95050 263 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 APOL3O95236 402 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 RBP4P02753 201 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 IGLL1P15814 213 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 GDNFP39905 211 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 DYNLT3P51808 116 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 LGALS4P56470 323 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 EDDM3BP56851 147 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 ESRRGP62508 458 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 ODF4Q2M2E3 257 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 SLX4IPQ5VYV7 408 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 C10orf99Q6UWK7 81 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 REC114Q7Z4M0 266 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 CATSPERDQ86XM0 798 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 OR8H2Q8N162 312 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 TCEANCQ8N8B7 351 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 RPS4Y2Q8TD47 263 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 FOXRED1Q96CU9 486 aaPredicted RBP8.54□□□□□ -1.04
USE1-203ENST00000593597 SLC7A6OSQ96CW6 309 aaPredicted RBP8.54□□□□□ -1.04
USE1-203ENST00000593597 MALSU1Q96EH3 234 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 CEP19Q96LK0 163 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 TBX5Q99593 518 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 CHST6Q9GZX3 395 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 ZNF556Q9HAH1 456 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 NECAP2Q9NVZ3 263 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 CLN6Q9NWW5 311 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 DNAJB9Q9UBS3 223 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 HILPDAQ9Y5L2 63 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 TMEM14AQ9Y6G1 99 aa8.54□□□□□ -1.04
USE1-203ENST00000593597 IGHV2-26A0A0B4J1V2 119 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 IGKV1-9A0A0C4DH69 117 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 A0A1W2PPH5 198 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 A0A1W2PRX2 142 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 SH2D7A6NKC9 451 aaPredicted RBP8.53□□□□□ -1.04
USE1-203ENST00000593597 DHRS7CA6NNS2 312 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 K7EIL1 84 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 RPP14O95059 124 aaKnown RBP8.53□□□□□ -1.04
USE1-203ENST00000593597 ALX3O95076 343 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 CALCBP10092 127 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 CD24P25063 80 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 DUSP1P28562 367 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 KIR3DL2P43630 455 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 NPBWR2P48146 333 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 LOXL3P58215 753 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 KRTAP10-11P60412 298 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 ISL1P61371 349 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 ACTA2P62736 377 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 ACTG2P63267 376 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 ACTC1P68032 377 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 ACTA1P68133 377 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 CD83Q01151 205 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 ZNF91Q05481 1191 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 EDDM3AQ14507 147 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 NXNL2Q5VZ03 156 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 SPATA24Q86W54 205 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 PRSS35Q8N3Z0 413 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 WFDC9Q8NEX5 89 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 OR4S1Q8NGB4 309 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 OR4P4Q8NGL7 312 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 OR13D1Q8NGV5 346 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 TMEM163Q8TC26 289 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 ZNF714Q96N38 554 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 PRSS22Q9GZN4 317 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 RBFOX1Q9NWB1 397 aaKnown RBP8.53□□□□□ -1.04
USE1-203ENST00000593597 POMPQ9Y244 141 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 SNX5Q9Y5X3 404 aa8.53□□□□□ -1.04
USE1-203ENST00000593597 hCG_1809904A0A1W2PP81 198 aa8.52□□□□□ -1.05
USE1-203ENST00000593597 A0A1W2PPE2 198 aa8.52□□□□□ -1.05
USE1-203ENST00000593597 A0A1W2PQL4 384 aaPredicted RBP8.52□□□□□ -1.05
USE1-203ENST00000593597 A0A1W2PR64 198 aa8.52□□□□□ -1.05
USE1-203ENST00000593597 A0A1W2PRV1 198 aa8.52□□□□□ -1.05
USE1-203ENST00000593597 ZNF670-ZNF695F2Z2N8 137 aa8.52□□□□□ -1.05
USE1-203ENST00000593597 XPNPEP2O43895 674 aa8.52□□□□□ -1.05
USE1-203ENST00000593597 ENTPD6O75354 484 aa8.52□□□□□ -1.05
USE1-203ENST00000593597 FAM107AO95990 144 aa8.52□□□□□ -1.05
USE1-203ENST00000593597 HAND1O96004 215 aa8.52□□□□□ -1.05
USE1-203ENST00000593597 AMY1AP04745 511 aa8.52□□□□□ -1.05
USE1-203ENST00000593597 AMY2AP04746 511 aa8.52□□□□□ -1.05
USE1-203ENST00000593597 CHRM2P08172 466 aa8.52□□□□□ -1.05
USE1-203ENST00000593597 POLR2IP36954 125 aaKnown RBP8.52□□□□□ -1.05
USE1-203ENST00000593597 VDAC2P45880 294 aaPredicted RBP8.52□□□□□ -1.05
USE1-203ENST00000593597 OR3A1P47881 315 aa8.52□□□□□ -1.05
USE1-203ENST00000593597 DYNC1I2Q13409 638 aaKnown RBP8.52□□□□□ -1.05
USE1-203ENST00000593597 FLOT2Q14254 428 aa8.52□□□□□ -1.05
USE1-203ENST00000593597 C11orf87Q6NUJ2 197 aa8.52□□□□□ -1.05
USE1-203ENST00000593597 SLC25A26Q70HW3 274 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms