RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 OR5D18Q8NGL1 313 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 OR52N1Q8NH53 320 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 FBLIM1Q8WUP2 373 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 RGP1Q92546 391 aaPredicted RBP11.49□□□□□ -0.57
CLIP3-205ENST00000592017 EMG1Q92979 244 aaKnown RBP11.49□□□□□ -0.57
CLIP3-205ENST00000592017 WDFY2Q96P53 400 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 DUX5Q96PT3 197 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 ZCCHC4Q9H5U6 513 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 CNTD2Q9H8S5 307 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 NEK6Q9HC98 313 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 HES4Q9HCC6 221 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 BABAM2Q9NXR7 383 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 MTCH1Q9NZJ7 389 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 MAB21L2Q9Y586 359 aa11.49□□□□□ -0.57
CLIP3-205ENST00000592017 SIRT4Q9Y6E7 314 aaPredicted RBP11.49□□□□□ -0.57
CLIP3-205ENST00000592017 PNMA8CA0A1B0GUJ8 204 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 F8VVB4 439 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 F8VWA3 439 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 GPR37O15354 613 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 LALBAP00709 142 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 KNG1P01042 644 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 RPSAP08865 295 aaKnown RBP11.48□□□□□ -0.57
CLIP3-205ENST00000592017 CALCBP10092 127 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 MMP9P14780 707 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 PRDX2P32119 198 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 SNU13P55769 128 aaKnown RBP11.48□□□□□ -0.57
CLIP3-205ENST00000592017 ERVK11-1P61568 191 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 C11orf91Q3C1V1 193 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 RUSC1-AS1Q66K80 236 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 IZUMO2Q6UXV1 221 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 C9orf139Q6ZV77 190 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 SERPINA12Q8IW75 414 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 PDZD9Q8IXQ8 264 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 MKXQ8IYA7 352 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 FAM185AQ8N0U4 392 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 ASCC1Q8N9N2 400 aaKnown RBP11.48□□□□□ -0.57
CLIP3-205ENST00000592017 OR5D14Q8NGL3 314 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 OR13C5Q8NGS8 318 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 GPR148Q8TDV2 347 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 LHX4Q969G2 390 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 SMIM19Q96E16 107 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 SDSLQ96GA7 329 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 TBX15Q96SF7 602 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 SIRPDQ9H106 197 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 RBFOX1Q9NWB1 397 aaKnown RBP11.48□□□□□ -0.57
CLIP3-205ENST00000592017 TAS2R4Q9NYW5 299 aa11.48□□□□□ -0.57
CLIP3-205ENST00000592017 MDFIC2A0A1B0GVS7 189 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 DNAJC9-AS1A6NH13 148 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 H0YJX3 145 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 SULT1B1O43704 296 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 ANGPTL7O43827 346 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 ATP6V1G2O95670 118 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 CD2P06729 351 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 BCL3P20749 454 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 PRTN3P24158 256 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 C21orf33P30042 268 aaPredicted RBP11.47□□□□□ -0.57
CLIP3-205ENST00000592017 NPBWR2P48146 333 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 CAV3P56539 151 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 PRB3Q04118 309 aaPredicted RBP11.47□□□□□ -0.57
CLIP3-205ENST00000592017 BAMBIQ13145 260 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 FIP1L1Q6UN15 594 aaKnown RBP11.47□□□□□ -0.57
CLIP3-205ENST00000592017 RNF144BQ7Z419 303 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 VMO1Q7Z5L0 202 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 CMTM4Q8IZR5 234 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 ZNF561Q8N587 486 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 PARP16Q8N5Y8 322 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 LY6G5BQ8NDX9 201 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 SIRT7Q9NRC8 400 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 PLCXD1Q9NUJ7 323 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 IL36RNQ9UBH0 155 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 KPTNQ9Y664 436 aa11.47□□□□□ -0.57
CLIP3-205ENST00000592017 PTGES3LE9PB15 166 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 OGG1O15527 345 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 MT-ND2P03891 347 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 PRKACAP17612 351 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 DLX1P56177 255 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 COL10A1Q03692 680 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 PDZK1IP1Q13113 114 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 PDCD1Q15116 288 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 C6orf141Q5SZD1 244 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 Q8IYB0 196 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 OR4M1Q8NGD0 313 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 C8orf46Q8TAG6 207 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 RPS4Y2Q8TD47 263 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 GHSRQ92847 366 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 TMEM106AQ96A25 262 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 C19orf12Q9NSK7 152 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 SCN3BQ9NY72 215 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 ERGIC3Q9Y282 383 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 ZNF281Q9Y2X9 895 aa11.46□□□□□ -0.57
CLIP3-205ENST00000592017 TRBV23-1A0A0A0MS06 115 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 IGKV1-12A0A0C4DH73 117 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 MAGEB3O15480 346 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 HAND1O96004 215 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 IGKV1D-12P01611 117 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 CDK1P06493 297 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 TMEM225BP0DP42 221 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 RAB3AP20336 220 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 DUSP1P28562 367 aa11.45□□□□□ -0.58
CLIP3-205ENST00000592017 WNT4P56705 351 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms