RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 SLC23A3Q6PIS1 610 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 TAF9BQ9HBM6 251 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 TINAGQ9UJW2 476 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 FREM1Q5H8C1 2179 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 MED13Q9UHV7 2174 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 PLXNB3Q9ULL4 1909 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 TRBV5-7A0A0A0MS05 114 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 MSTNO14793 375 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 ST8SIA3O43173 380 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 SPRY3O43610 288 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 SSSCA1O60232 199 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 NGFP01138 241 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 MRPS34P82930 218 aaKnown RBP12.75□□□□□ -0.37
RETREG3-208ENST00000589797 UBE2V2Q15819 145 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 TOR2AQ5JU69 321 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 CHRNA10Q9GZZ6 450 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 SLC17A5Q9NRA2 495 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 ERRFI1Q9UJM3 462 aaPredicted RBP12.75□□□□□ -0.37
RETREG3-208ENST00000589797 VSIG4Q9Y279 399 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 C2orf16Q68DN1 1984 aa12.75□□□□□ -0.37
RETREG3-208ENST00000589797 CDIPTO14735 213 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 SP1P08047 785 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 NKX2-1P43699 371 aaPredicted RBP12.74□□□□□ -0.37
RETREG3-208ENST00000589797 TMEM88Q6PEY1 159 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 ZNF573Q86YE8 665 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 ARRDC1Q8N5I2 433 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 RTL8AQ9BWD3 113 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 GPR87Q9BY21 358 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 LPAR5Q9H1C0 372 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 DYNLRB1Q9NP97 96 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 GFOD1Q9NXC2 390 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 ZNF319Q9P2F9 582 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 PUS1Q9Y606 427 aaKnown RBP eCLIP12.74□□□□□ -0.37
RETREG3-208ENST00000589797 ZGRF1Q86YA3 2104 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 OTOGLQ3ZCN5 2332 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 TRAV17A0A0B4J275 112 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 B4E171 279 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 ONECUT2O95948 504 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 IAPPP10997 89 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 RPL12P30050 165 aaKnown RBP12.74□□□□□ -0.37
RETREG3-208ENST00000589797 TSPAN7P41732 249 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 ZFP62Q8NB50 900 aaPredicted RBP12.74□□□□□ -0.37
RETREG3-208ENST00000589797 DMBX1Q8NFW5 382 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 OR5AP2Q8NGF4 316 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 AIFM2Q9BRQ8 373 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 MSL2Q9HCI7 577 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 PRSS50Q9UI38 385 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 CRYAAP02489 173 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 CD80P33681 288 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 PHYHD1Q5SRE7 291 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 FAM27BQ5VT28 67 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 CLEC18BQ6UXF7 455 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 KCNJ16Q9NPI9 418 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 PROCRQ9UNN8 238 aa12.74□□□□□ -0.37
RETREG3-208ENST00000589797 C7orf66A4D0T2 115 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 NPIPB7O75200 414 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 RAG2P55895 527 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 HAS2Q92819 552 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 ZC3H10Q96K80 434 aaKnown RBP12.73□□□□□ -0.37
RETREG3-208ENST00000589797 IMMP1LQ96LU5 166 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 AK3Q9UIJ7 227 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 OR2F2O95006 317 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 OR5AC1P0C628 307 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 OR2Z1Q8NG97 314 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 OR10V1Q8NGI7 309 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 B3GAT1Q9P2W7 334 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 IGHV3-43A0A0B4J1X8 118 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 SNAPC5O75971 98 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 MPC2O95563 127 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 IGHV3-43DP0DP04 118 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 ZNF674Q2M3X9 581 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 PPP1R35Q8TAP8 253 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 RNF141Q8WVD5 230 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 H1FXQ92522 213 aaKnown RBP12.73□□□□□ -0.37
RETREG3-208ENST00000589797 GFI1Q99684 422 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 GHRLQ9UBU3 117 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 GTF3C1Q12789 2109 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 KIR2DS1A0A191URI9 304 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 RFPL4AA6NLU0 287 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 RFPL4AL1F8VTS6 287 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 NDUFB7P17568 137 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 RPL35P42766 123 aaKnown RBP12.73□□□□□ -0.37
RETREG3-208ENST00000589797 KIR2DS4P43632 304 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 TAGLNQ01995 201 aaKnown RBP12.73□□□□□ -0.37
RETREG3-208ENST00000589797 KIR2DS1Q14954 304 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 SPANXN5Q5MJ07 72 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 BAP18Q8IXM2 172 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 TIMP4Q99727 224 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 SULT4A1Q9BR01 284 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 FBXO7Q9Y3I1 522 aa12.73□□□□□ -0.37
RETREG3-208ENST00000589797 PLXNA2O75051 1894 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 ATRXP46100 2492 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 C3orf80F5H4A9 247 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 H3BUI4 141 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 IFI6P09912 130 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 SELEP16581 610 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 CALCRP30988 508 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 AKR1C3P42330 323 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 MECP2P51608 486 aaKnown RBP12.72□□□□□ -0.37
RETREG3-208ENST00000589797 CASP6P55212 293 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms