RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 AKAP6Q13023 2319 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 CENPEQ02224 2701 aa12.74□□□□□ -0.37
ATG4D-211ENST00000589753 MAST4O15021 2626 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 IGHV3OR15-7A0A075B7D8 119 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 TRAV38-1A0A0B4J264 116 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 A6NHS1 94 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 TMEM127O75204 238 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 FSTL3O95633 263 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 IGHV2-70P01814 119 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 CALCBP10092 127 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 MUC1P15941 1255 aaPredicted RBP12.73□□□□□ -0.37
ATG4D-211ENST00000589753 PRKACAP17612 351 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 CAPZA1P52907 286 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 ZMYND11Q15326 602 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 MICBQ29980 383 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 FOXB2Q5VYV0 432 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 FIP1L1Q6UN15 594 aaKnown RBP12.73□□□□□ -0.37
ATG4D-211ENST00000589753 PRSS57Q6UWY2 283 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 FAM90A1Q86YD7 464 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 DEFB108BQ8NET1 73 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 Q8NFD4 153 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 BARHL1Q9BZE3 327 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 CST11Q9H112 138 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 HMG20AQ9NP66 347 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 NLKQ9UBE8 527 aa12.73□□□□□ -0.37
ATG4D-211ENST00000589753 A0A0B4J203 849 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 A0A1W2PP11 408 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 ISPDA4D126 451 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 CRTAPO75718 401 aaPredicted RBP12.72□□□□□ -0.37
ATG4D-211ENST00000589753 VSIG8P0DPA2 414 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 GTF2F2P13984 249 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 SOX6P35712 828 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 MDH2P40926 338 aaKnown RBP12.72□□□□□ -0.37
ATG4D-211ENST00000589753 FGF12P61328 243 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 KCNJ8Q15842 424 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 C2orf76Q3KRA6 126 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 SHEQ5VZ18 495 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 OR2W3Q7Z3T1 314 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 LRRC28Q86X40 367 aaPredicted RBP12.72□□□□□ -0.37
ATG4D-211ENST00000589753 OSR2Q8N2R0 312 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 MUC20Q8N307 709 aaPredicted RBP12.72□□□□□ -0.37
ATG4D-211ENST00000589753 KCNG3Q8TAE7 436 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 DYNC2LI1Q8TCX1 351 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 FAM46BQ96A09 425 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 MRI1Q9BV20 369 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 BPESC1Q9GZL8 116 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 KCNK15Q9H427 330 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 TMEM165Q9HC07 324 aa12.72□□□□□ -0.37
ATG4D-211ENST00000589753 NBPF19A0A087WUL8 3843 aa12.71□□□□□ -0.37
ATG4D-211ENST00000589753 OR2AT4A6NND4 320 aa12.71□□□□□ -0.37
ATG4D-211ENST00000589753 TMEM14DPA8MWL7 114 aa12.71□□□□□ -0.37
ATG4D-211ENST00000589753 KNG1P01042 644 aa12.71□□□□□ -0.37
ATG4D-211ENST00000589753 SNRPBP14678 240 aaKnown RBP12.71□□□□□ -0.37
ATG4D-211ENST00000589753 MGMTP16455 207 aa12.71□□□□□ -0.37
ATG4D-211ENST00000589753 ART1P52961 327 aa12.71□□□□□ -0.37
ATG4D-211ENST00000589753 SNU13P55769 128 aaKnown RBP12.71□□□□□ -0.37
ATG4D-211ENST00000589753 QRFPP83859 136 aa12.71□□□□□ -0.37
ATG4D-211ENST00000589753 ZNF404Q494X3 552 aa12.71□□□□□ -0.37
ATG4D-211ENST00000589753 SPIN3Q5JUX0 258 aa12.71□□□□□ -0.37
ATG4D-211ENST00000589753 OR10K2Q6IF99 312 aa12.71□□□□□ -0.37
ATG4D-211ENST00000589753 TMEM104Q8NE00 496 aa12.71□□□□□ -0.37
ATG4D-211ENST00000589753 OR5T2Q8NGG2 359 aa12.71□□□□□ -0.37
ATG4D-211ENST00000589753 OR51T1Q8NGJ9 327 aa12.71□□□□□ -0.37
ATG4D-211ENST00000589753 MRPS24Q96EL2 167 aaKnown RBP12.71□□□□□ -0.37
ATG4D-211ENST00000589753 BANF2Q9H503 90 aa12.71□□□□□ -0.37
ATG4D-211ENST00000589753 ABRACLQ9P1F3 81 aa12.71□□□□□ -0.37
ATG4D-211ENST00000589753 IL36RNQ9UBH0 155 aa12.71□□□□□ -0.37
ATG4D-211ENST00000589753 TACC2O95359 2948 aa12.71□□□□□ -0.38
ATG4D-211ENST00000589753 ABCA12Q86UK0 2595 aa12.71□□□□□ -0.38
ATG4D-211ENST00000589753 SPG11Q96JI7 2443 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 IGHV4-30-2A0A087WSY4 118 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 TMEM272A0A1B0GTI8 110 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 VWC2LB2RUY7 222 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 LDLRAD4O15165 306 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 MPIG6BO95866 241 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 PAHP00439 452 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 GYPAP02724 150 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 PSG2P11465 335 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 SLC25A16P16260 332 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 ZNF182P17025 639 aaPredicted RBP12.7□□□□□ -0.38
ATG4D-211ENST00000589753 NR4A2P43354 598 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 RBM11P57052 281 aaKnown RBP12.7□□□□□ -0.38
ATG4D-211ENST00000589753 SCAND1P57086 179 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 UNC119Q13432 240 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 ZNF146Q15072 292 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 PIGYQ3MUY2 71 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 TMEM155Q4W5P6 130 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 NHLRC3Q5JS37 347 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 STUMQ69YW2 141 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 KRTAP1-3Q8IUG1 177 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 LGALS14Q8TCE9 139 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 AP3S1Q92572 193 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 KCTD12Q96CX2 325 aaKnown RBP12.7□□□□□ -0.38
ATG4D-211ENST00000589753 TMEM246Q9BRR3 403 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 TMEM59Q9BXS4 323 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 SELENOIQ9C0D9 397 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 CCDC59Q9P031 241 aaKnown RBP12.7□□□□□ -0.38
ATG4D-211ENST00000589753 FBLN5Q9UBX5 448 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 OR14J1Q9UGF5 321 aa12.7□□□□□ -0.38
ATG4D-211ENST00000589753 OR5V1Q9UGF6 321 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms