RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ANGPTL7O43827 346 aa16.74■□□□□ 0.27
DDX39A-207ENST00000588542 GPX5O75715 221 aa16.74■□□□□ 0.27
DDX39A-207ENST00000588542 BCL3P20749 454 aa16.74■□□□□ 0.27
DDX39A-207ENST00000588542 CEBPDP49716 269 aaPredicted RBP16.74■□□□□ 0.27
DDX39A-207ENST00000588542 IL13RA1P78552 427 aa16.74■□□□□ 0.27
DDX39A-207ENST00000588542 IKZF1Q13422 519 aa16.74■□□□□ 0.27
DDX39A-207ENST00000588542 TBCEQ15813 527 aaPredicted RBP16.74■□□□□ 0.27
DDX39A-207ENST00000588542 OR52N4Q8NGI2 321 aa16.74■□□□□ 0.27
DDX39A-207ENST00000588542 OR5D18Q8NGL1 313 aa16.74■□□□□ 0.27
DDX39A-207ENST00000588542 ST8SIA4Q92187 359 aa16.74■□□□□ 0.27
DDX39A-207ENST00000588542 MED30Q96HR3 178 aa16.74■□□□□ 0.27
DDX39A-207ENST00000588542 DERL3Q96Q80 235 aa16.74■□□□□ 0.27
DDX39A-207ENST00000588542 NUDT16L1Q9BRJ7 211 aaKnown RBP16.74■□□□□ 0.27
DDX39A-207ENST00000588542 YTHDF1Q9BYJ9 559 aaKnown RBP16.74■□□□□ 0.27
DDX39A-207ENST00000588542 METRNQ9UJH8 293 aa16.74■□□□□ 0.27
DDX39A-207ENST00000588542 DSCAML1Q8TD84 2053 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 TRAV8-7A0A075B6U6 113 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 A0A1W2PPK0 400 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 PIN1P1O15428 100 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 NDUFB3O43676 98 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 KNG1P01042 644 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 ALDOBP05062 364 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 FAM157CP0CG43 387 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 FSTP19883 344 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 PRDX2P32119 198 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 GPR50Q13585 617 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 TPBGQ13641 420 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 INSL4Q14641 139 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 C11orf91Q3C1V1 193 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 CD276Q5ZPR3 534 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 UNQ9370/PRO34162Q6UXP9 181 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 BTN2A1Q7KYR7 527 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 Q8IYB0 196 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 ZNRF1Q8ND25 227 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 RBFOX1Q9NWB1 397 aaKnown RBP16.73■□□□□ 0.27
DDX39A-207ENST00000588542 IL36RNQ9UBH0 155 aa16.73■□□□□ 0.27
DDX39A-207ENST00000588542 CYB5AP00167 134 aa16.72■□□□□ 0.27
DDX39A-207ENST00000588542 SRD5A1P18405 259 aa16.72■□□□□ 0.27
DDX39A-207ENST00000588542 ADRA2CP18825 462 aa16.72■□□□□ 0.27
DDX39A-207ENST00000588542 MLLT11Q13015 90 aaPredicted RBP16.72■□□□□ 0.27
DDX39A-207ENST00000588542 LRRC10Q5BKY1 277 aa16.72■□□□□ 0.27
DDX39A-207ENST00000588542 LIPKQ5VXJ0 399 aa16.72■□□□□ 0.27
DDX39A-207ENST00000588542 SAXO1Q8IYX7 474 aa16.72■□□□□ 0.27
DDX39A-207ENST00000588542 MS4A15Q8N5U1 240 aa16.72■□□□□ 0.27
DDX39A-207ENST00000588542 EMG1Q92979 244 aaKnown RBP16.72■□□□□ 0.27
DDX39A-207ENST00000588542 NKX3-1Q99801 234 aaPredicted RBP16.72■□□□□ 0.27
DDX39A-207ENST00000588542 TMED9Q9BVK6 235 aa16.72■□□□□ 0.27
DDX39A-207ENST00000588542 TMEM138Q9NPI0 162 aa16.72■□□□□ 0.27
DDX39A-207ENST00000588542 ACOT13Q9NPJ3 140 aa16.72■□□□□ 0.27
DDX39A-207ENST00000588542 AUP1Q9Y679 476 aa16.72■□□□□ 0.27
DDX39A-207ENST00000588542 MAGEA13PA6NCF6 341 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 GABRPO00591 440 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 GPR37O15354 613 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 MAGEB3O15480 346 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 ENSAO43768 121 aaKnown RBP16.71■□□□□ 0.27
DDX39A-207ENST00000588542 MRPS14O60783 128 aaKnown RBP16.71■□□□□ 0.27
DDX39A-207ENST00000588542 SC5DO75845 299 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 KDM4BO94953 1096 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 ECDO95905 644 aaPredicted RBP16.71■□□□□ 0.27
DDX39A-207ENST00000588542 FSHBP01225 129 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 SFTPBP07988 381 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 HSMCR30P0CW71 290 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 BDKRB2P30411 391 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 TGFBR2P37173 567 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 GP2P55259 537 aaKnown RBP16.71■□□□□ 0.27
DDX39A-207ENST00000588542 CAV3P56539 151 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 PPP3R1P63098 170 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 EMX1Q04741 257 aaPredicted RBP16.71■□□□□ 0.27
DDX39A-207ENST00000588542 ACSM3Q53FZ2 586 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 BTNL3Q6UXE8 466 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 C1QL2Q7Z5L3 287 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 SATL1Q86VE3 508 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 PRIMA1Q86XR5 153 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 FAM58AQ8N1B3 248 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 ZSCAN4Q8NAM6 433 aaPredicted RBP16.71■□□□□ 0.27
DDX39A-207ENST00000588542 LY6G5BQ8NDX9 201 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 UFD1Q92890 307 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 MGLLQ99685 303 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 NOX4Q9NPH5 578 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 SLC25A10Q9UBX3 287 aaPredicted RBP16.71■□□□□ 0.27
DDX39A-207ENST00000588542 OR14J1Q9UGF5 321 aa16.71■□□□□ 0.27
DDX39A-207ENST00000588542 RPUSD1Q9UJJ7 312 aaKnown RBP16.71■□□□□ 0.27
DDX39A-207ENST00000588542 TMEM225BP0DP42 221 aa16.7■□□□□ 0.26
DDX39A-207ENST00000588542 CALCBP10092 127 aa16.7■□□□□ 0.26
DDX39A-207ENST00000588542 CPEP16870 476 aa16.7■□□□□ 0.26
DDX39A-207ENST00000588542 SRP14P37108 136 aaKnown RBP16.7■□□□□ 0.26
DDX39A-207ENST00000588542 DDI2Q5TDH0 399 aa16.7■□□□□ 0.26
DDX39A-207ENST00000588542 ZNF561Q8N587 486 aa16.7■□□□□ 0.26
DDX39A-207ENST00000588542 DCTN5Q9BTE1 182 aa16.7■□□□□ 0.26
DDX39A-207ENST00000588542 MRI1Q9BV20 369 aa16.7■□□□□ 0.26
DDX39A-207ENST00000588542 HMG20AQ9NP66 347 aa16.7■□□□□ 0.26
DDX39A-207ENST00000588542 FOXJ3Q9UPW0 622 aa16.7■□□□□ 0.26
DDX39A-207ENST00000588542 SF3B6Q9Y3B4 125 aaKnown RBP16.7■□□□□ 0.26
DDX39A-207ENST00000588542 PRKACAP17612 351 aa16.69■□□□□ 0.26
DDX39A-207ENST00000588542 ZNF146Q15072 292 aa16.69■□□□□ 0.26
DDX39A-207ENST00000588542 KLF17Q5JT82 389 aaPredicted RBP16.69■□□□□ 0.26
DDX39A-207ENST00000588542 FAM27D1Q5T7N8 215 aa16.69■□□□□ 0.26
DDX39A-207ENST00000588542 ASCL4Q6XD76 172 aa16.69■□□□□ 0.26
DDX39A-207ENST00000588542 ZNF367Q7RTV3 350 aa16.69■□□□□ 0.26
DDX39A-207ENST00000588542 PHC2Q8IXK0 858 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms