RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 C16orf89Q6UX73 402 aa9.46□□□□□ -0.9
BRCA1-225ENST00000586385 PLEKHG7Q6ZR37 379 aa9.46□□□□□ -0.9
BRCA1-225ENST00000586385 ELMOD2Q8IZ81 293 aa9.46□□□□□ -0.9
BRCA1-225ENST00000586385 APOL4Q9BPW4 351 aa9.46□□□□□ -0.9
BRCA1-225ENST00000586385 MROQ9BYG7 248 aa9.46□□□□□ -0.9
BRCA1-225ENST00000586385 PKIBQ9C010 78 aa9.46□□□□□ -0.9
BRCA1-225ENST00000586385 DNAJB9Q9UBS3 223 aa9.46□□□□□ -0.9
BRCA1-225ENST00000586385 SESN1Q9Y6P5 492 aa9.46□□□□□ -0.9
BRCA1-225ENST00000586385 PSPNO60542 156 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 ZNF254O75437 659 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 HMGN1P05114 100 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 CHRM2P08172 466 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 OSMP13725 252 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 PRKACGP22612 351 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 GDNFP39905 211 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 MEF2CQ06413 473 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-225ENST00000586385 CD69Q07108 199 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 EDDM3AQ14507 147 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 UBE2V2Q15819 145 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 ZNF829Q3KNS6 432 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-225ENST00000586385 ABCA11PQ4W5N1 156 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 LCN1P1Q5VSP4 162 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 KCTD18Q6PI47 426 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-225ENST00000586385 C18orf65Q6ZTR6 163 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 GDPD3Q7L5L3 318 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 CENPVQ7Z7K6 275 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-225ENST00000586385 DHFR2Q86XF0 187 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 MRPL41Q8IXM3 137 aaKnown RBP9.45□□□□□ -0.9
BRCA1-225ENST00000586385 ADGRG5Q8IZF4 528 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 NDNFQ8TB73 568 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 TRMT10AQ8TBZ6 339 aaKnown RBP9.45□□□□□ -0.9
BRCA1-225ENST00000586385 CADM1Q9BY67 442 aaKnown RBP9.45□□□□□ -0.9
BRCA1-225ENST00000586385 TMEM133Q9H2Q1 129 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 LIN7BQ9HAP6 207 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 SLC25A19Q9HC21 320 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 HHLA2Q9UM44 414 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 LINC00312Q9Y6C7 94 aa9.45□□□□□ -0.9
BRCA1-225ENST00000586385 DSCAML1Q8TD84 2053 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 INMTO95050 263 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 DUS4LO95620 317 aaKnown RBP9.44□□□□□ -0.9
BRCA1-225ENST00000586385 CCL1P22362 96 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 HTR1DP28221 377 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 RIDAP52758 137 aaKnown RBP9.44□□□□□ -0.9
BRCA1-225ENST00000586385 TRIM25Q14258 630 aaKnown RBP9.44□□□□□ -0.9
BRCA1-225ENST00000586385 GK3PQ14409 553 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 FAM98BQ52LJ0 330 aaKnown RBP9.44□□□□□ -0.9
BRCA1-225ENST00000586385 BCDIN3DQ7Z5W3 292 aaKnown RBP9.44□□□□□ -0.9
BRCA1-225ENST00000586385 ZNF676Q8N7Q3 588 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 BCAS4Q8TDM0 211 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 SLAMF9Q96A28 289 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 SNX22Q96L94 193 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 CEP19Q96LK0 163 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 SLC25A33Q9BSK2 321 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 CHID1Q9BWS9 393 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 CLEC7AQ9BXN2 247 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 CHST6Q9GZX3 395 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 MRM2Q9UI43 246 aaKnown RBP9.44□□□□□ -0.9
BRCA1-225ENST00000586385 OR52A1Q9UKL2 312 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 IKZF2Q9UKS7 526 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 R4GMQ9 66 aa9.44□□□□□ -0.9
BRCA1-225ENST00000586385 FAM230AA0A1W2PPH8 454 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 hADV38S2A0JD32 116 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 LOC110117498-PIK3R3F6TDL0 507 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 E2F6O75461 281 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 OR2F2O95006 317 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 HAND1O96004 215 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 CST1P01037 141 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 IGLV1-47P01700 117 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 CCDC159P0C7I6 412 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 RAP2AP10114 183 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 DUSP1P28562 367 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 OR3A1P47881 315 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 ESRRGP62508 458 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 BDH1Q02338 343 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 ZNF91Q05481 1191 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 NKAPLQ5M9Q1 402 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 PRAMEF5Q5TYX0 476 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 ZNF322Q6U7Q0 402 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-225ENST00000586385 SSX6Q7RTT6 188 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 C16orf82Q7Z2V1 217 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 ASB17Q8WXJ9 295 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 RBM14Q96PK6 669 aaKnown RBP9.43□□□□□ -0.9
BRCA1-225ENST00000586385 SEBOXQ9HB31 216 aaPredicted RBP9.43□□□□□ -0.9
BRCA1-225ENST00000586385 RBFOX1Q9NWB1 397 aaKnown RBP9.43□□□□□ -0.9
BRCA1-225ENST00000586385 DPM3Q9P2X0 92 aa9.43□□□□□ -0.9
BRCA1-225ENST00000586385 FAM172BPA6NC97 362 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 DHRS7CA6NNS2 312 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 LY6LH3BQJ8 138 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 H3BSH0 61 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 M0R129 80 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 PRKYO43930 277 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 DNAJC8O75937 253 aaPredicted RBP9.42□□□□□ -0.9
BRCA1-225ENST00000586385 CALCBP10092 127 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 NPBWR2P48146 333 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 THBS3P49746 956 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 CXCR4P61073 352 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 GRK1Q15835 563 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 KHDC1LQ5JSQ8 128 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 BCL2L15Q5TBC7 163 aa9.42□□□□□ -0.9
BRCA1-225ENST00000586385 SLC25A26Q70HW3 274 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms