RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 PEX2P28328 305 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 RAB13P51153 203 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 FUT6P51993 359 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 CRISP1P54107 249 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 DLX6P56179 175 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 ACTA2P62736 377 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 ACTG2P63267 376 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 ACTC1P68032 377 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 ACTA1P68133 377 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 SLC34A1Q06495 639 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 MFGE8Q08431 387 aaPredicted RBP11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 HABP2Q14520 560 aaPredicted RBP11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 MEPCEQ7L2J0 689 aaKnown RBP11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 TMEM179BQ7Z7N9 219 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 TMEM219Q86XT9 240 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 LYG1Q8N1E2 194 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 ZNF676Q8N7Q3 588 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 OR14K1Q8NGZ2 314 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 NDNFQ8TB73 568 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 PHF21AQ96BD5 680 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 SNX22Q96L94 193 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 CLN6Q9NWW5 311 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 ENOPH1Q9UHY7 261 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 LINC00312Q9Y6C7 94 aa11.74□□□□□ -0.53
CDC42EP4-208ENST00000582303 FAM230AA0A1W2PPH8 454 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 CCDC182A6NF36 153 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 ZNF737O75373 536 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 DUS4LO95620 317 aaKnown RBP11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 PRKACGP22612 351 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 BRS3P32247 399 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 NXNL2Q5VZ03 156 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 HIST2H2BDQ6DRA6 164 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 OR52W1Q6IF63 320 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 Q6ZSR3 168 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 SPATA24Q86W54 205 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 GID4Q8IVV7 300 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 SLC35F2Q8IXU6 374 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 WFDC9Q8NEX5 89 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 WIPF2Q8TF74 440 aaPredicted RBP11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 C10orf35Q96D05 121 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 OR5M11Q96RB7 305 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 THTPAQ9BU02 230 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 TTTY10Q9BZA0 68 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 SEBOXQ9HB31 216 aaPredicted RBP11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 AURKAIP1Q9NWT8 199 aaPredicted RBP11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 COPS3Q9UNS2 423 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 SESN1Q9Y6P5 492 aa11.73□□□□□ -0.53
CDC42EP4-208ENST00000582303 FUOMA2VDF0 154 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 SYT7O43581 403 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 SRSF10O75494 262 aaKnown RBP11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 PF4P02776 101 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 CCL1P22362 96 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 HTR1DP28221 377 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 SLC35A2P78381 396 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 FLOT2Q14254 428 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 PTGES3Q15185 160 aaKnown RBP11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 CCBE1Q6UXH8 406 aaPredicted RBP11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 ANGPTL5Q86XS5 388 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 EGFL6Q8IUX8 553 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 DYNAPQ8N1N2 210 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 CCDC197Q8NCU1 140 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 OR5AU1Q8NGC0 362 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 TRMT10AQ8TBZ6 339 aaKnown RBP11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 CREB3L1Q96BA8 519 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 BORCS8Q96FH0 119 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 APOL4Q9BPW4 351 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 CLEC7AQ9BXN2 247 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 GPR61Q9BZJ8 451 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 TMEM133Q9H2Q1 129 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 HILPDAQ9Y5L2 63 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 PLXNB1O43157 2135 aa11.72□□□□□ -0.53
CDC42EP4-208ENST00000582303 IGHV2-26A0A0B4J1V2 119 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 A0A1B0GTI1 187 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 GABRR1P24046 479 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 CD83Q01151 205 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 EDDM3AQ14507 147 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 GRK1Q15835 563 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 DNAL1Q4LDG9 190 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 CENPVQ7Z7K6 275 aaPredicted RBP11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 RTN4RL2Q86UN3 420 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 HS3ST5Q8IZT8 346 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 YIPF7Q8N8F6 280 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 OR4X2Q8NGF9 303 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 ZNF596Q8TC21 504 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 PP6455Q8WZ26 134 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 EMG1Q92979 244 aaKnown RBP11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 STMN2Q93045 179 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 CHST5Q9GZS9 411 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 GAL3ST2Q9H3Q3 398 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 LIN7BQ9HAP6 207 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 KRT84Q9NSB2 600 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 PCDHGB5Q9Y5G0 923 aa11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 TSSC4Q9Y5U2 329 aaPredicted RBP11.71□□□□□ -0.53
CDC42EP4-208ENST00000582303 A6NIN4 97 aa11.7□□□□□ -0.54
CDC42EP4-208ENST00000582303 FAM90A22PA8MWA6 464 aa11.7□□□□□ -0.54
CDC42EP4-208ENST00000582303 PRR32B1ATL7 298 aa11.7□□□□□ -0.54
CDC42EP4-208ENST00000582303 MGST3O14880 152 aa11.7□□□□□ -0.54
CDC42EP4-208ENST00000582303 PRKYO43930 277 aa11.7□□□□□ -0.54
CDC42EP4-208ENST00000582303 FKBP6O75344 327 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms