RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 CMSS1Q9BQ75 279 aaKnown RBP7.98□□□□□ -1.13
SS18-220ENST00000582092 OCSTAMPQ9BR26 566 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 OR2J1Q9GZK6 312 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 PLK3Q9H4B4 646 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 ZNF442Q9H7R0 627 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 CHMP1AQ9HD42 196 aaPredicted RBP7.98□□□□□ -1.13
SS18-220ENST00000582092 TMEM100Q9NV29 134 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 ZNF701Q9NV72 531 aaPredicted RBP7.98□□□□□ -1.13
SS18-220ENST00000582092 IL36GQ9NZH8 169 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 ST3GAL6Q9Y274 331 aa7.98□□□□□ -1.13
SS18-220ENST00000582092 FREM1Q5H8C1 2179 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 A0A1W2PP11 408 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 PQLC2LA1A4F0 135 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 A8MV72 311 aaPredicted RBP7.97□□□□□ -1.13
SS18-220ENST00000582092 VSTM5A8MXK1 200 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 TIMM8AO60220 97 aaPredicted RBP7.97□□□□□ -1.13
SS18-220ENST00000582092 ICMTO60725 284 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 CA11O75493 328 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 CGAP01215 116 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 CRYAAP02489 173 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 PMP2P02689 132 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 IL5P05113 134 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 CELA3BP08861 270 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 GLI4P10075 376 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 COX6B1P14854 86 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 FUT3P21217 361 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 BMP5P22003 454 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 CHRNB4P30926 498 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 CEACAM8P31997 349 aaPredicted RBP7.97□□□□□ -1.13
SS18-220ENST00000582092 ZNF83P51522 516 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 ADORA2A-AS1P86434 159 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 ASCL4Q6XD76 172 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 RFPL4BQ6ZWI9 263 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 FBXL14Q8N1E6 418 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 GVQW1Q8N7I0 195 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 FAM169BQ8N8A8 192 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 WDR31Q8NA23 367 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 UXS1Q8NBZ7 420 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 OR4S1Q8NGB4 309 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 OR5P3Q8WZ94 311 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 SLAMF9Q96A28 289 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 MED30Q96HR3 178 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 Q96M66 194 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 DMRTB1Q96MA1 342 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 C1orf147Q96MC9 270 aaPredicted RBP7.97□□□□□ -1.13
SS18-220ENST00000582092 DMRTA2Q96SC8 542 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 TINAGL1Q9GZM7 467 aaPredicted RBP7.97□□□□□ -1.13
SS18-220ENST00000582092 KCNJ16Q9NPI9 418 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.97□□□□□ -1.13
SS18-220ENST00000582092 ELOVL5Q9NYP7 299 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 ZNF629Q9UEG4 869 aaPredicted RBP7.97□□□□□ -1.13
SS18-220ENST00000582092 GLS2Q9UI32 602 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 HSF4Q9ULV5 492 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 EDARQ9UNE0 448 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 FLVCR2Q9UPI3 526 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 POLDIP2Q9Y2S7 368 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 KCNK7Q9Y2U2 307 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 FAM215AQ9Y5M1 114 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 NAV2Q8IVL1 2488 aa7.97□□□□□ -1.13
SS18-220ENST00000582092 HCFC1P51610 2035 aa7.96□□□□□ -1.13
SS18-220ENST00000582092 IGKV1-27A0A075B6S5 117 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 A0A0A6YYD4 124 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 TMEM82A0PJX8 343 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 FAM90A10PA6NDY2 464 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 FAM90A18PA6NE21 464 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 FAM90A16PA6NEW6 464 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 FAM90A20PA6NIJ5 464 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 FAM90A8PA6NJQ4 464 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 FAM90A7PA6NKC0 464 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 FAM90A22PA8MWA6 464 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 SNRPGP15A8MWD9 76 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 FAM90A12PA8MX19 464 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 FAM90A5PA8MXJ8 464 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 FAM90A23PA8MXZ1 464 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 MCRIP1C9JLW8 97 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 MFNGO00587 321 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 OR7C1O76099 320 aaPredicted RBP7.96□□□□□ -1.14
SS18-220ENST00000582092 IGKV3-15P01624 115 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 CD74P04233 296 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 FAM90A15PP0C7V4 464 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 FAM90A13PP0C7W8 464 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 FAM90A14PP0C7W9 464 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 FAM90A24PP0C7X0 464 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 ANXA3P12429 323 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 COL8A1P27658 744 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 HRH1P35367 487 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 FABP6P51161 128 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 SNU13P55769 128 aaKnown RBP7.96□□□□□ -1.14
SS18-220ENST00000582092 TMEM50BP56557 158 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 RPS23P62266 143 aaKnown RBP7.96□□□□□ -1.14
SS18-220ENST00000582092 PLAC9Q5JTB6 97 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 OR52W1Q6IF63 320 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 LIN54Q6MZP7 749 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 RGS7BPQ6MZT1 257 aaPredicted RBP7.96□□□□□ -1.14
SS18-220ENST00000582092 C11orf88Q6PI97 169 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 HAGHLQ6PII5 290 aaPredicted RBP7.96□□□□□ -1.14
SS18-220ENST00000582092 GLDNQ6ZMI3 551 aaPredicted RBP7.96□□□□□ -1.14
SS18-220ENST00000582092 SEM1Q6ZVN7 128 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 SSX8Q7RTT4 187 aa7.96□□□□□ -1.14
SS18-220ENST00000582092 TMED4Q7Z7H5 227 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms