RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 GPER1Q99527 375 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 S100A13Q99584 98 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 PDCD1LG2Q9BQ51 273 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 NRIP2Q9BQI9 281 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 DCTN5Q9BTE1 182 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 ZCCHC4Q9H5U6 513 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 SCN3BQ9NY72 215 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 CKLFQ9UBR5 152 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 NKX1-2Q9UD57 310 aaPredicted RBP5.42□□□□□ -1.54
TRAF4-213ENST00000578917 DIMT1Q9UNQ2 313 aaKnown RBP5.42□□□□□ -1.54
TRAF4-213ENST00000578917 ERGIC3Q9Y282 383 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 KPTNQ9Y664 436 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 TENM1Q9UKZ4 2725 aa5.42□□□□□ -1.54
TRAF4-213ENST00000578917 IGKV1-27A0A075B6S5 117 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 TRBV23-1A0A0A0MS06 115 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 IGHV1-69DA0A0B4J2H0 117 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 CENPVL3A0A0U1RRI6 287 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 PNMA8CA0A1B0GUJ8 204 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 A0A1W2PRD5 423 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 A0A1W2PRF3 423 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 A0A1W2PRM7 423 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 MYL12BO14950 172 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 CASQ2O14958 399 aaPredicted RBP5.41□□□□□ -1.54
TRAF4-213ENST00000578917 SPRY1O43609 319 aaPredicted RBP5.41□□□□□ -1.54
TRAF4-213ENST00000578917 XPNPEP2O43895 674 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 PAHP00439 452 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 KNG1P01042 644 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 FSHBP01225 129 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 IGHV1-69P01742 117 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 TK1P04183 234 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 PIPP12273 146 aaPredicted RBP5.41□□□□□ -1.54
TRAF4-213ENST00000578917 PRKACAP17612 351 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 AMY2BP19961 511 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 MPZP25189 248 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 DUSP1P28562 367 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 CEBPDP49716 269 aaPredicted RBP5.41□□□□□ -1.54
TRAF4-213ENST00000578917 CAV3P56539 151 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 EDDM3BP56851 147 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 PPP3R1P63098 170 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 COL10A1Q03692 680 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 PDZK1IP1Q13113 114 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 DEFB112Q30KQ8 113 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 RUSC1-AS1Q66K80 236 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 C12orf54Q6X4T0 127 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 C1orf122Q6ZSJ8 110 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 Q6ZSR3 168 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 AHSA2Q719I0 299 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 VMO1Q7Z5L0 202 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 FAM58AQ8N1B3 248 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 C3orf56Q8N813 242 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 OR5D18Q8NGL1 313 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 OR5D13Q8NGL4 314 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 FAM216AQ8WUB2 273 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 ZFAND2BQ8WV99 257 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 TFAP2CQ92754 450 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 GGHQ92820 318 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 GHSRQ92847 366 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 RNF166Q96A37 237 aaPredicted RBP5.41□□□□□ -1.54
TRAF4-213ENST00000578917 SDSLQ96GA7 329 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 DMRTB1Q96MA1 342 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 NR1H4Q96RI1 486 aaPredicted RBP5.41□□□□□ -1.54
TRAF4-213ENST00000578917 FAM192AQ9GZU8 254 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 METTL8Q9H825 291 aaKnown RBP5.41□□□□□ -1.54
TRAF4-213ENST00000578917 HEXA-AS1Q9H8Q6 139 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 SIRT7Q9NRC8 400 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 MTCH1Q9NZJ7 389 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 CLEC2DQ9UHP7 191 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 GSTK1Q9Y2Q3 226 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 ZNF281Q9Y2X9 895 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 MAB21L2Q9Y586 359 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 SOX21Q9Y651 276 aaPredicted RBP5.41□□□□□ -1.54
TRAF4-213ENST00000578917 SVEP1Q4LDE5 3571 aa5.41□□□□□ -1.54
TRAF4-213ENST00000578917 FBN3Q75N90 2809 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 ARHGAP32A7KAX9 2087 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 IGKV1-9A0A0C4DH69 117 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 MEIOCA2RUB1 952 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 BTBD17A6NE02 478 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 F8VVB4 439 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 F8VWA3 439 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 K7N7A8 449 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 DEGS1O15121 323 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 HOXA3O43365 443 aaPredicted RBP5.4□□□□□ -1.54
TRAF4-213ENST00000578917 SULT1B1O43704 296 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 ANGPTL7O43827 346 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 HAND1O96004 215 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 MT-ND2P03891 347 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 CELP19835 753 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 BCL3P20749 454 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 PRTN3P24158 256 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 NPBWR2P48146 333 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 HSPA13P48723 471 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 LGALS4P56470 323 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 TAS2R43P59537 309 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 UBA52P62987 128 aaKnown RBP5.4□□□□□ -1.54
TRAF4-213ENST00000578917 GUCA2AQ02747 115 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 PRB3Q04118 309 aaPredicted RBP5.4□□□□□ -1.54
TRAF4-213ENST00000578917 EDDM3AQ14507 147 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 RSU1Q15404 277 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 KISS1Q15726 138 aa5.4□□□□□ -1.54
TRAF4-213ENST00000578917 GRK1Q15835 563 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms