RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 UBE2J1Q9Y385 318 aaPredicted RBP8.44□□□□□ -1.06
CCDC40-212ENST00000574799 CDC14CA4D256 554 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 CEBPZOSA8MTT3 80 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 HRKO00198 91 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 TNFRSF10CO14798 259 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 IFNA5P01569 189 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 HBE1P02100 147 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 OPRM1P35372 400 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 ZNF41P51814 821 aaPredicted RBP8.44□□□□□ -1.06
CCDC40-212ENST00000574799 EFNA3P52797 238 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 ERVS71-1P61550 626 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 CCL20P78556 96 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 GPR137CQ8N3F9 429 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 OR10A7Q8NGE5 316 aa8.44□□□□□ -1.06
CCDC40-212ENST00000574799 ONECUT2O95948 504 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 SLC35E2P0CK97 266 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 ZNF728P0DKX0 622 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 ATP6V0CP27449 155 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 GNRHRP30968 328 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 GLIPR1P48060 266 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 WDR25Q64LD2 544 aaPredicted RBP8.43□□□□□ -1.06
CCDC40-212ENST00000574799 TMEM156Q8N614 296 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 BCORP1Q8N888 145 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 OR5R1Q8NH85 324 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 SCGB1C1Q8TD33 95 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 RTN4IP1Q8WWV3 396 aaPredicted RBP8.43□□□□□ -1.06
CCDC40-212ENST00000574799 COL27A1Q8IZC6 1860 aaPredicted RBP8.43□□□□□ -1.06
CCDC40-212ENST00000574799 H3BMH7 237 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 H7BYZ3 331 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 DVL1O14640 695 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 CNOT4O95628 575 aaKnown RBP8.43□□□□□ -1.06
CCDC40-212ENST00000574799 MBPP02686 304 aaPredicted RBP8.43□□□□□ -1.06
CCDC40-212ENST00000574799 BCKDHBP21953 392 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 DUSP1P28562 367 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 PTGER4P35408 488 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 OR3A4PP47883 348 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 SUPT4H1P63272 117 aaKnown RBP8.43□□□□□ -1.06
CCDC40-212ENST00000574799 HIKESHIQ53FT3 197 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 C1orf100Q5SVJ3 147 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 C1orf140Q5VVS0 124 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 PRSS58Q8IYP2 241 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 OR1P1Q8NH06 330 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 HOXB13Q92826 284 aaPredicted RBP8.43□□□□□ -1.06
CCDC40-212ENST00000574799 ADAT3Q96EY9 351 aaPredicted RBP8.43□□□□□ -1.06
CCDC40-212ENST00000574799 HIST1H2AAQ96QV6 131 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 SYT3Q9BQG1 590 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 ABHD14AQ9BUJ0 271 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 SPTY2D1-AS1A0A0U1RR47 76 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 MARCH11A6NNE9 402 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 PRAMEF26H0Y7S4 382 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 OR5AC1P0C628 307 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 FUT3P21217 361 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 MPZP25189 248 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 FMODQ06828 376 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 VAX1Q5SQQ9 334 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 FAM166AQ6J272 317 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 LYZL2Q7Z4W2 148 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 SLC37A2Q8TED4 501 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 RTBDNQ9BSG5 229 aaPredicted RBP8.43□□□□□ -1.06
CCDC40-212ENST00000574799 HRASLS2Q9NWW9 162 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 PLA2G2EQ9NZK7 142 aa8.43□□□□□ -1.06
CCDC40-212ENST00000574799 HLA-HP01893 362 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 GZMBP10144 247 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 OR3A1P47881 315 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 MMP16P51512 607 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 NUBP1P53384 320 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 SLC16A14Q7RTX9 510 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 TMEM183AQ8IXX5 376 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 SLC26A10Q8NG04 563 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 ABHD5Q8WTS1 349 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 PTX4Q96A99 478 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 MVB12AQ96EY5 273 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 FOXQ1Q9C009 403 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 RFNGQ9Y644 331 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 EXPH5Q8NEV8 1989 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 DHRS7CA6NNS2 312 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 FAM157AC9JC47 383 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 SSSCA1O60232 199 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 FSTP19883 344 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 CSRP1P21291 193 aaKnown RBP8.42□□□□□ -1.06
CCDC40-212ENST00000574799 HERPUD1Q15011 391 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 TOMM20LQ6UXN7 152 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 ZNF695Q8IW36 515 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 C16orf52Q8NHV5 167 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 BAHD1Q8TBE0 780 aaPredicted RBP8.42□□□□□ -1.06
CCDC40-212ENST00000574799 DAZLQ92904 295 aaKnown RBP8.42□□□□□ -1.06
CCDC40-212ENST00000574799 RNF166Q96A37 237 aaPredicted RBP8.42□□□□□ -1.06
CCDC40-212ENST00000574799 GPX7Q96SL4 187 aaPredicted RBP8.42□□□□□ -1.06
CCDC40-212ENST00000574799 SNHG12Q9BXW3 62 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 KIAA1456Q9P272 454 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 MYOTQ9UBF9 498 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 HEATR5AQ86XA9 2040 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 FREM3P0C091 2139 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 IGKV1D-42A0A075B6H8 117 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 MSTNO14793 375 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 SEMA4FO95754 770 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 AMBPP02760 352 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 RUNX1Q01196 453 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 TESK1Q15569 626 aa8.42□□□□□ -1.06
CCDC40-212ENST00000574799 CD226Q15762 336 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms