RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 SLC35E3Q7Z769 313 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 TMEM123Q8N131 208 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 FBXL14Q8N1E6 418 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 OR6X1Q8NH79 312 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 OR14L1PQ8NHC6 308 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 SNIP1Q8TAD8 396 aaKnown RBP12.6□□□□□ -0.39
SMG6-215ENST00000574501 SLC37A2Q8TED4 501 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 THOC3Q96J01 351 aaKnown RBP12.6□□□□□ -0.39
SMG6-215ENST00000574501 PLEKHJ1Q9NW61 149 aa12.6□□□□□ -0.39
SMG6-215ENST00000574501 SPTBN5Q9NRC6 3674 aaKnown RBP12.6□□□□□ -0.39
SMG6-215ENST00000574501 CCDC163A0A0D9SF12 145 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 FAM230AA0A1W2PPH8 454 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 IGSF23A1L1A6 192 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 DVL1O14640 695 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 ZNF728P0DKX0 622 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 ZNF43P17038 809 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 CD200P41217 278 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 BIDP55957 195 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 GNMTQ14749 295 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 LANCL3Q6ZV70 420 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 FAM57BQ71RH2 274 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 TMEM183AQ8IXX5 376 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 OR2C3Q8N628 320 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 OR11L1Q8NGX0 322 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 CLDND2Q8NHS1 167 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 ANXA10Q9UJ72 324 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 TMEM131Q92545 1883 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 LAMA1P25391 3075 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 SERPINE3A8MV23 424 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 E9PLN8 166 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 HNRNPA1P09651 372 aaKnown RBP eCLIP12.59□□□□□ -0.39
SMG6-215ENST00000574501 PNLIPP16233 465 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 SFTPDP35247 375 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 ECI1P42126 302 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 HSD17B7P56937 341 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 RAB11AP62491 216 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 HSF1Q00613 529 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 SLC10A1Q14973 349 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 ZNF506Q5JVG8 444 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 TANGO2Q6ICL3 276 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 CRIP3Q6Q6R5 217 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 MEX3BQ6ZN04 569 aaKnown RBP12.59□□□□□ -0.39
SMG6-215ENST00000574501 TSLPQ969D9 159 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 ADIPOR1Q96A54 375 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 C18orf12Q96KH6 178 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 ZNF581Q9P0T4 197 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 LHFPL6Q9Y693 200 aa12.59□□□□□ -0.39
SMG6-215ENST00000574501 FRG2CA6NGY1 282 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 DAP3P51398 398 aaKnown RBP12.58□□□□□ -0.4
SMG6-215ENST00000574501 RUNX3Q13761 415 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 ZNF266Q14584 549 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 FAM189A2Q15884 450 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 LIAT1Q6ZQX7 453 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 TMEM217Q8N7C4 229 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 OR4X1Q8NH49 305 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 RCC1LQ96I51 464 aaKnown RBP12.58□□□□□ -0.4
SMG6-215ENST00000574501 SLC46A1Q96NT5 459 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 SNHG12Q9BXW3 62 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 CRISPLD2Q9H0B8 497 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 WDFY3Q8IZQ1 3526 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 CLDN34H7C241 214 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 RER1O15258 196 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 PHF1O43189 567 aaPredicted RBP12.58□□□□□ -0.4
SMG6-215ENST00000574501 CST7O76096 145 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 MMP7P09237 267 aaPredicted RBP12.58□□□□□ -0.4
SMG6-215ENST00000574501 PGA3P0DJD8 388 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 MMP9P14780 707 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 FOLR1P15328 257 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 TLE3Q04726 772 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 MFAP5Q13361 173 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 ARMC6Q6NXE6 501 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 GRINAQ7Z429 371 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 BEND2Q8NDZ0 799 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 DYRK2Q92630 601 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 FAAP24Q9BTP7 215 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 CABLES2Q9BTV7 478 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 MAGT1Q9H0U3 335 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 CALHM2Q9HA72 323 aa12.58□□□□□ -0.4
SMG6-215ENST00000574501 ALG1L2C9J202 215 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 EPHA1P21709 976 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 TFF2Q03403 129 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 PLCXD2Q0VAA5 305 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 RSPO4Q2I0M5 234 aaPredicted RBP12.57□□□□□ -0.4
SMG6-215ENST00000574501 BRICD5Q6PL45 260 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 SLC35G3Q8N808 338 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 SLC38A9Q8NBW4 561 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 OR5C1Q8NGR4 320 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 SSC4DQ8WTU2 575 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 MSI2Q96DH6 328 aaKnown RBP12.57□□□□□ -0.4
SMG6-215ENST00000574501 TMEM106CQ9BVX2 250 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 SLC2A9Q9NRM0 540 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 GNG13Q9P2W3 67 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 RP1P56715 2156 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 RRP8O43159 456 aaKnown RBP12.57□□□□□ -0.4
SMG6-215ENST00000574501 CD55P08174 381 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 OR4A8P0C604 315 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 FCGR2AP12318 317 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 ZNF25P17030 456 aaPredicted RBP12.57□□□□□ -0.4
SMG6-215ENST00000574501 COL10A1Q03692 680 aa12.57□□□□□ -0.4
SMG6-215ENST00000574501 TAF9Q16594 264 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms