RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 DGCR6LQ9BY27 220 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 CHST6Q9GZX3 395 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 GTF2A1LQ9UNN4 478 aa13.91□□□□□ -0.18
CCDC40-211ENST00000574099 TMEM82A0PJX8 343 aa13.9□□□□□ -0.18
CCDC40-211ENST00000574099 F8VVB4 439 aa13.9□□□□□ -0.18
CCDC40-211ENST00000574099 F8VWA3 439 aa13.9□□□□□ -0.18
CCDC40-211ENST00000574099 IGLV3-1P01715 115 aa13.9□□□□□ -0.18
CCDC40-211ENST00000574099 ALOX5APP20292 161 aa13.9□□□□□ -0.18
CCDC40-211ENST00000574099 LUMP51884 338 aaPredicted RBP13.9□□□□□ -0.18
CCDC40-211ENST00000574099 ERVK11-1P61568 191 aa13.9□□□□□ -0.18
CCDC40-211ENST00000574099 RPS7P62081 194 aaKnown RBP13.9□□□□□ -0.18
CCDC40-211ENST00000574099 MEF2CQ06413 473 aaPredicted RBP13.9□□□□□ -0.18
CCDC40-211ENST00000574099 MFGE8Q08431 387 aaPredicted RBP13.9□□□□□ -0.18
CCDC40-211ENST00000574099 CLVS2Q5SYC1 327 aa13.9□□□□□ -0.18
CCDC40-211ENST00000574099 CASC10Q5T4H9 136 aa13.9□□□□□ -0.18
CCDC40-211ENST00000574099 TRAPPC6BQ86SZ2 158 aa13.9□□□□□ -0.18
CCDC40-211ENST00000574099 BBS1Q8NFJ9 593 aa13.9□□□□□ -0.18
CCDC40-211ENST00000574099 DPM3Q9P2X0 92 aa13.9□□□□□ -0.18
CCDC40-211ENST00000574099 SAMHD1Q9Y3Z3 626 aaKnown RBP13.9□□□□□ -0.18
CCDC40-211ENST00000574099 LSM4Q9Y4Z0 139 aaKnown RBP13.9□□□□□ -0.18
CCDC40-211ENST00000574099 LINC00312Q9Y6C7 94 aa13.9□□□□□ -0.18
CCDC40-211ENST00000574099 PRR32B1ATL7 298 aa13.89□□□□□ -0.19
CCDC40-211ENST00000574099 IGHA1P01876 353 aa13.89□□□□□ -0.19
CCDC40-211ENST00000574099 MPZP25189 248 aa13.89□□□□□ -0.19
CCDC40-211ENST00000574099 SNAPC1Q16533 368 aa13.89□□□□□ -0.19
CCDC40-211ENST00000574099 MICAQ29983 383 aa13.89□□□□□ -0.19
CCDC40-211ENST00000574099 PRAMEF5Q5TYX0 476 aa13.89□□□□□ -0.19
CCDC40-211ENST00000574099 KCTD18Q6PI47 426 aaPredicted RBP13.89□□□□□ -0.19
CCDC40-211ENST00000574099 CYP2R1Q6VVX0 501 aa13.89□□□□□ -0.19
CCDC40-211ENST00000574099 ZBTB49Q6ZSB9 765 aa13.89□□□□□ -0.19
CCDC40-211ENST00000574099 MUC7Q8TAX7 377 aa13.89□□□□□ -0.19
CCDC40-211ENST00000574099 ZMAT5Q9UDW3 170 aaKnown RBP13.89□□□□□ -0.19
CCDC40-211ENST00000574099 STAB2Q8WWQ8 2551 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 SACSQ9NZJ4 4579 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 FAM230AA0A1W2PPH8 454 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 ACOD1A6NK06 481 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 TTRP02766 147 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 MRPL3P09001 348 aaKnown RBP13.88□□□□□ -0.19
CCDC40-211ENST00000574099 GABRR1P24046 479 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 MYCNOSP40205 109 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 ARHGDIBP52566 201 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 GRK1Q15835 563 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 ABHD12Q8N2K0 398 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 OR10G2Q8NGC3 310 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 SLAMF9Q96A28 289 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 SNX22Q96L94 193 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 NOL4LQ96MY1 436 aaPredicted RBP13.88□□□□□ -0.19
CCDC40-211ENST00000574099 P2RX4Q99571 388 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 MROQ9BYG7 248 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 REEP1Q9H902 201 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 PAPOLBQ9NRJ5 636 aaKnown RBP13.88□□□□□ -0.19
CCDC40-211ENST00000574099 IL36RNQ9UBH0 155 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.88□□□□□ -0.19
CCDC40-211ENST00000574099 BIRC6Q9NR09 4857 aa13.88□□□□□ -0.19
CCDC40-211ENST00000574099 DLGAP1O14490 977 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 PRODHO43272 600 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 RAMP3O60896 148 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 SASH3O75995 380 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 SNRNP70P08621 437 aaKnown RBP13.87□□□□□ -0.19
CCDC40-211ENST00000574099 ATP6V1B2P21281 511 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 OR3A4PP47883 348 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 IL24Q13007 206 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 ZNF829Q3KNS6 432 aaPredicted RBP13.87□□□□□ -0.19
CCDC40-211ENST00000574099 LCN1P1Q5VSP4 162 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 TMEM42Q69YG0 159 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 CPOQ8IVL8 374 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 OR52N4Q8NGI2 321 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 ITFG2Q969R8 447 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 CEP19Q96LK0 163 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 CDRT15Q96T59 188 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 CADM1Q9BY67 442 aaKnown RBP13.87□□□□□ -0.19
CCDC40-211ENST00000574099 PKIBQ9C010 78 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 MTCH1Q9NZJ7 389 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 NUFIP1Q9UHK0 495 aaKnown RBP13.87□□□□□ -0.19
CCDC40-211ENST00000574099 LINC00527Q9UJ94 153 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 IKZF2Q9UKS7 526 aa13.87□□□□□ -0.19
CCDC40-211ENST00000574099 LEUTXA8MZ59 168 aa13.86□□□□□ -0.19
CCDC40-211ENST00000574099 ZFPL1O95159 310 aa13.86□□□□□ -0.19
CCDC40-211ENST00000574099 HAND1O96004 215 aa13.86□□□□□ -0.19
CCDC40-211ENST00000574099 PEX2P28328 305 aa13.86□□□□□ -0.19
CCDC40-211ENST00000574099 MAGEA2P43356 314 aa13.86□□□□□ -0.19
CCDC40-211ENST00000574099 RIDAP52758 137 aaKnown RBP13.86□□□□□ -0.19
CCDC40-211ENST00000574099 ZNF596Q8TC21 504 aa13.86□□□□□ -0.19
CCDC40-211ENST00000574099 MYLK2Q9H1R3 596 aa13.86□□□□□ -0.19
CCDC40-211ENST00000574099 HHLA2Q9UM44 414 aa13.86□□□□□ -0.19
CCDC40-211ENST00000574099 COPS3Q9UNS2 423 aa13.86□□□□□ -0.19
CCDC40-211ENST00000574099 MOB4Q9Y3A3 225 aa13.86□□□□□ -0.19
CCDC40-211ENST00000574099 HSPE1-MOB4S4R3N1 261 aa13.86□□□□□ -0.19
CCDC40-211ENST00000574099 V9GYS6 101 aa13.86□□□□□ -0.19
CCDC40-211ENST00000574099 LOC110117498-PIK3R3F6TDL0 507 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 H3BSH0 61 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 M0QZK8 103 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 PSPNO60542 156 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 DUSP1P28562 367 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 PRDX6P30041 224 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 GDNFP39905 211 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 ECI1P42126 302 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 SNU13P55769 128 aaKnown RBP13.85□□□□□ -0.19
CCDC40-211ENST00000574099 BDH1Q02338 343 aa13.85□□□□□ -0.19
CCDC40-211ENST00000574099 APOFQ13790 326 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms