RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 GDPD3Q7L5L3 318 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 KRT74Q7RTS7 529 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 OR52N4Q8NGI2 321 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 OR14K1Q8NGZ2 314 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 MROQ9BYG7 248 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 MTCH1Q9NZJ7 389 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 NUFIP1Q9UHK0 495 aaKnown RBP9.64□□□□□ -0.87
CAPN3-220ENST00000569827 POLDIP2Q9Y2S7 368 aa9.64□□□□□ -0.87
CAPN3-220ENST00000569827 STAB2Q8WWQ8 2551 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 A0A1B0GTI1 187 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 NOS1APO75052 506 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-220ENST00000569827 GDNFP39905 211 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 GYS2P54840 703 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 ERVK11-1P61568 191 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 CBX1P83916 185 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 CDK5Q00535 292 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 ZNF829Q3KNS6 432 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-220ENST00000569827 SLC35D3Q5M8T2 416 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 UTF1Q5T230 341 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 BCL2L15Q5TBC7 163 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 TMEM42Q69YG0 159 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 KCTD18Q6PI47 426 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-220ENST00000569827 ZNF679Q8IYX0 411 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 DTX3Q8N9I9 347 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 OR4P4Q8NGL7 312 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 ZNF649Q9BS31 505 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 SLC25A33Q9BSK2 321 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 YIPF3Q9GZM5 350 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 TVP23BQ9NYZ1 205 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 TSSC4Q9Y5U2 329 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-220ENST00000569827 SESN1Q9Y6P5 492 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 V9GYS6 101 aa9.63□□□□□ -0.87
CAPN3-220ENST00000569827 B2RBV5 119 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 RPP14O95059 124 aaKnown RBP9.62□□□□□ -0.87
CAPN3-220ENST00000569827 AMY1AP04745 511 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 AMY2AP04746 511 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 HMGN1P05114 100 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 OSMP13725 252 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 ATP6V1B1P15313 513 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 GABRR1P24046 479 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 MPZP25189 248 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 DYNLT3P51808 116 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 CXCR4P61073 352 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 SNAPC1Q16533 368 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 ETV3LQ6ZN32 361 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 SSX6Q7RTT6 188 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 TRAPPC6BQ86SZ2 158 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 ADGRG5Q8IZF4 528 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 OR8H2Q8N162 312 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 LINC00482Q8N8I6 264 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 RCC1LQ96I51 464 aaKnown RBP9.62□□□□□ -0.87
CAPN3-220ENST00000569827 TBX5Q99593 518 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 CHID1Q9BWS9 393 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 CLEC7AQ9BXN2 247 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 TMEM133Q9H2Q1 129 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 OR52A1Q9UKL2 312 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 DNAH7Q8WXX0 4024 aa9.62□□□□□ -0.87
CAPN3-220ENST00000569827 ACOD1A6NK06 481 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 FAM90A22PA8MWA6 464 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 DLGAP1O14490 977 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 GNGT2O14610 69 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 PRKYO43930 277 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 PSPNO60542 156 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 E2F6O75461 281 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 HAND1O96004 215 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 ALDOBP05062 364 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 CHRM2P08172 466 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 RAP2AP10114 183 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 BCL3P20749 454 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 NPBWR2P48146 333 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 ROM1Q03395 351 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 UBE2V2Q15819 145 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 GRK1Q15835 563 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 ZNF322Q6U7Q0 402 aaPredicted RBP9.61□□□□□ -0.87
CAPN3-220ENST00000569827 SLC25A26Q70HW3 274 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 ZNF329Q86UD4 541 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 SLC35F2Q8IXU6 374 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 ELMOD2Q8IZ81 293 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 OR4X2Q8NGF9 303 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 EMG1Q92979 244 aaKnown RBP9.61□□□□□ -0.87
CAPN3-220ENST00000569827 CEP19Q96LK0 163 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 WWC2-AS2Q96NR7 200 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 DUX3Q96PT4 197 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 CNN2Q99439 309 aaKnown RBP9.61□□□□□ -0.87
CAPN3-220ENST00000569827 RBFOX1Q9NWB1 397 aaKnown RBP9.61□□□□□ -0.87
CAPN3-220ENST00000569827 NDE1Q9NXR1 346 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 ING3Q9NXR8 418 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 R4GMQ9 66 aa9.61□□□□□ -0.87
CAPN3-220ENST00000569827 hADV38S2A0JD32 116 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 ARRDC5A6NEK1 342 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 SIRPB1O00241 398 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 DNAJC8O75937 253 aaPredicted RBP9.6□□□□□ -0.87
CAPN3-220ENST00000569827 APOL3O95236 402 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 RBP4P02753 201 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 AZGP1P25311 298 aaKnown RBP9.6□□□□□ -0.87
CAPN3-220ENST00000569827 HTR1DP28221 377 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 POU3F4P49335 361 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 EGFEM1PQ0D2K5 195 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 IL24Q13007 206 aa9.6□□□□□ -0.87
CAPN3-220ENST00000569827 TRIM25Q14258 630 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms