RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 NPEPL1Q8NDH3 523 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 TMEM158Q8WZ71 300 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 FUNDC2Q9BWH2 189 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 PURGQ9UJV8 347 aaKnown RBP5.81□□□□□ -1.48
SMG1-217ENST00000569764 HHLA2Q9UM44 414 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 PCDH15Q96QU1 1955 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 ABCA4P78363 2273 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 IGHV1-45A0A0A0MS14 117 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 A0A1B0GTH9 108 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 FEZF1A0PJY2 475 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 STATHP02808 62 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 DBIP07108 87 aaKnown RBP5.81□□□□□ -1.48
SMG1-217ENST00000569764 ZNF14P17017 642 aaPredicted RBP5.81□□□□□ -1.48
SMG1-217ENST00000569764 DLX5P56178 289 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 ST3GAL4Q11206 333 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 SLCO4C1Q6ZQN7 724 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 TBC1D26Q86UD7 250 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 NAA40Q86UY6 237 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 LINC01555Q8NAE3 123 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 LFNGQ8NES3 379 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 SLC26A10Q8NG04 563 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 OR2AJ1Q8NGZ0 328 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 CENPNQ96H22 339 aaPredicted RBP5.81□□□□□ -1.48
SMG1-217ENST00000569764 WWTR1Q9GZV5 400 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 ARL6Q9H0F7 186 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 SCN3BQ9NY72 215 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 IKZF2Q9UKS7 526 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 TMED7Q9Y3B3 224 aa5.81□□□□□ -1.48
SMG1-217ENST00000569764 SPTBP11277 2137 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 IGKV1-8A0A0C4DH67 115 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 DHRS7CA6NNS2 312 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 FAM220BPB1ANY3 271 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 H3BMQ9 156 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 K7EP13 123 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 RFC3P40938 356 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 RAB25P57735 213 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 IL13RA1P78552 427 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 DOC2BQ14184 412 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 IGFBP7Q16270 282 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 OR2G6Q5TZ20 316 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 AAED1Q7RTV5 226 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 MDGA2Q7Z553 956 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 MRPL41Q8IXM3 137 aaKnown RBP5.8□□□□□ -1.48
SMG1-217ENST00000569764 RNF113BQ8IZP6 322 aaKnown RBP5.8□□□□□ -1.48
SMG1-217ENST00000569764 BMPERQ8N8U9 685 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 NUP43Q8NFH3 380 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 OR4A4PQ8NGN8 299 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 OR10A6Q8NH74 314 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 MACROD1Q9BQ69 325 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 ACKR4Q9NPB9 350 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 RNF6Q9Y252 685 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 SPTBN1Q01082 2364 aaKnown RBP5.8□□□□□ -1.48
SMG1-217ENST00000569764 A0A1W2PPV9 198 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 PRSS29PA6NIE9 313 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 NCR1O76036 304 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 DNASE1L1P49184 302 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 CDK5R2Q13319 367 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 SERTAD4-AS1Q5TG53 156 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 TMEM179BQ7Z7N9 219 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 C11orf42Q8N5U0 333 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 OR5M9Q8NGP3 310 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 NEIL3Q8TAT5 605 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 ABHD4Q8TB40 342 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 ABHD5Q8WTS1 349 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 SLC38A5Q8WUX1 472 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 MS4A8Q9BY19 250 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 NXF5Q9H1B4 397 aaKnown RBP5.8□□□□□ -1.48
SMG1-217ENST00000569764 MIXL1Q9H2W2 232 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 CISD1Q9NZ45 108 aaKnown RBP5.8□□□□□ -1.48
SMG1-217ENST00000569764 PPIAL4EA0A075B759 164 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 TMEM129A0AVI4 362 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 FRG2CA6NGY1 282 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 SMIM9A6NGZ8 99 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 BBIP1A8MTZ0 92 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 C4orf51C9J302 202 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 SYNGR3O43761 229 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 DBHP09172 617 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 PPIAL4FP0DN26 164 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 LAMP1P11279 417 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 EPXP11678 715 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 CERS1P27544 350 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 GDNFP39905 211 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 APOBEC1P41238 236 aaKnown RBP5.8□□□□□ -1.48
SMG1-217ENST00000569764 PPP3R1P63098 170 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 PRR27Q6MZM9 219 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 ZNF782Q6ZMW2 699 aaPredicted RBP5.8□□□□□ -1.48
SMG1-217ENST00000569764 MEPCEQ7L2J0 689 aaKnown RBP5.8□□□□□ -1.48
SMG1-217ENST00000569764 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.8□□□□□ -1.48
SMG1-217ENST00000569764 CMTM1Q8IZ96 169 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 CA13Q8N1Q1 262 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 RAB2BQ8WUD1 216 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 WFDC1Q9HC57 220 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 VPREB3Q9UKI3 123 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 HDGFL3Q9Y3E1 203 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 PPIAL4AQ9Y536 164 aa5.8□□□□□ -1.48
SMG1-217ENST00000569764 LOC105369274A0A096LPK9 316 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 LOC102725191A0A1B0GVB3 256 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 PSMB11A5LHX3 300 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 CTSBP07858 339 aa5.79□□□□□ -1.48
SMG1-217ENST00000569764 ADH4P08319 380 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms