RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 A0A1W2PQ09 198 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 FSHBP01225 129 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 CD1AP06126 327 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 DUX4L2P0CJ85 424 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 DUX4L3P0CJ86 424 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 DUX4L4P0CJ87 422 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 DUX4L5P0CJ88 424 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 DUX4L6P0CJ89 424 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 DUX4L7P0CJ90 424 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 CELP19835 753 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 BMXP51813 675 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 FGF12P61328 243 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 ERVK11-1P61568 191 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 ACSM1Q08AH1 577 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 PDZK1IP1Q13113 114 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 MED22Q15528 200 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 KISS1Q15726 138 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 DGUOKQ16854 277 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 SPIN3Q5JUX0 258 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 GPR157Q5UAW9 335 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 DUX4L9Q6RFH8 374 aaPredicted RBP10.76□□□□□ -0.69
CLK3-224ENST00000568605 C1orf229Q6ZS94 237 aaPredicted RBP10.76□□□□□ -0.69
CLK3-224ENST00000568605 SAXO1Q8IYX7 474 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 BATF2Q8N1L9 274 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 KIR3DL3Q8N743 410 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 ZSCAN4Q8NAM6 433 aaPredicted RBP10.76□□□□□ -0.69
CLK3-224ENST00000568605 RFT1Q96AA3 541 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 PGLYRP3Q96LB9 341 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 JMJD8Q96S16 334 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 DCTN5Q9BTE1 182 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 SUCNR1Q9BXA5 334 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 CCDC90BQ9GZT6 254 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 FAM234AQ9H0X4 552 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 TAS2R4Q9NYW5 299 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 MTCH1Q9NZJ7 389 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 DUX4Q9UBX2 424 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 KPTNQ9Y664 436 aa10.76□□□□□ -0.69
CLK3-224ENST00000568605 KIAA2026Q5HYC2 2103 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 A0A0A6YYJ9 748 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 TRBV5-5A0A0J9YX44 114 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 SPRY1O43609 319 aaPredicted RBP10.75□□□□□ -0.69
CLK3-224ENST00000568605 TOX4O94842 621 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 CHRM2P08172 466 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 SELLP14151 372 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 PRKACAP17612 351 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 FSTP19883 344 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 AMY2BP19961 511 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 BCL3P20749 454 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 CRHBPP24387 322 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 EEF1B2P24534 225 aaKnown RBP10.75□□□□□ -0.69
CLK3-224ENST00000568605 PRDX2P32119 198 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 BPIFB3P59826 476 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 BLMHQ13867 455 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 PDCD1Q15116 288 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 SPHARQ15513 63 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 DDI2Q5TDH0 399 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 RBMS3Q6XE24 437 aaKnown RBP10.75□□□□□ -0.69
CLK3-224ENST00000568605 PRSS48Q7RTY5 328 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 FAM58AQ8N1B3 248 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 MS4A15Q8N5U1 240 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 ASCC1Q8N9N2 400 aaKnown RBP10.75□□□□□ -0.69
CLK3-224ENST00000568605 ZNRF1Q8ND25 227 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 OR5D18Q8NGL1 313 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 C8orf46Q8TAG6 207 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 PPP1R35Q8TAP8 253 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 SPACA5Q96QH8 159 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 PCGF1Q9BSM1 259 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 FAM192AQ9GZU8 254 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 MS4A7Q9GZW8 240 aaPredicted RBP10.75□□□□□ -0.69
CLK3-224ENST00000568605 DUSP21Q9H596 190 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 TMEM138Q9NPI0 162 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 ONECUT1Q9UBC0 465 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 MAB21L2Q9Y586 359 aa10.75□□□□□ -0.69
CLK3-224ENST00000568605 SIRT4Q9Y6E7 314 aaPredicted RBP10.75□□□□□ -0.69
CLK3-224ENST00000568605 KDM4BO94953 1096 aa10.74□□□□□ -0.69
CLK3-224ENST00000568605 INMTO95050 263 aa10.74□□□□□ -0.69
CLK3-224ENST00000568605 ALDOBP05062 364 aa10.74□□□□□ -0.69
CLK3-224ENST00000568605 TMEM225BP0DP42 221 aa10.74□□□□□ -0.69
CLK3-224ENST00000568605 BDKRB2P30411 391 aa10.74□□□□□ -0.69
CLK3-224ENST00000568605 GABARAPL2P60520 117 aa10.74□□□□□ -0.69
CLK3-224ENST00000568605 ZNF529Q6P280 563 aa10.74□□□□□ -0.69
CLK3-224ENST00000568605 SATL1Q86VE3 508 aa10.74□□□□□ -0.69
CLK3-224ENST00000568605 CD177Q8N6Q3 437 aa10.74□□□□□ -0.69
CLK3-224ENST00000568605 OR13C5Q8NGS8 318 aa10.74□□□□□ -0.69
CLK3-224ENST00000568605 TBC1D15Q8TC07 691 aa10.74□□□□□ -0.69
CLK3-224ENST00000568605 UFD1Q92890 307 aa10.74□□□□□ -0.69
CLK3-224ENST00000568605 WDFY2Q96P53 400 aa10.74□□□□□ -0.69
CLK3-224ENST00000568605 OR14A2Q96R54 314 aa10.74□□□□□ -0.69
CLK3-224ENST00000568605 S100A13Q99584 98 aa10.74□□□□□ -0.69
CLK3-224ENST00000568605 CNTD2Q9H8S5 307 aa10.74□□□□□ -0.69
CLK3-224ENST00000568605 RBFOX1Q9NWB1 397 aaKnown RBP10.74□□□□□ -0.69
CLK3-224ENST00000568605 PAK1IP1Q9NWT1 392 aaPredicted RBP10.74□□□□□ -0.69
CLK3-224ENST00000568605 ATRQ13535 2644 aa10.73□□□□□ -0.69
CLK3-224ENST00000568605 hCG_1809904A0A1W2PP81 198 aa10.73□□□□□ -0.69
CLK3-224ENST00000568605 A0A1W2PPE2 198 aa10.73□□□□□ -0.69
CLK3-224ENST00000568605 A0A1W2PR64 198 aa10.73□□□□□ -0.69
CLK3-224ENST00000568605 A0A1W2PRV1 198 aa10.73□□□□□ -0.69
CLK3-224ENST00000568605 ANGPTL7O43827 346 aa10.73□□□□□ -0.69
CLK3-224ENST00000568605 FCN3O75636 299 aa10.73□□□□□ -0.69
CLK3-224ENST00000568605 HAND1O96004 215 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms