RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 PSG2P11465 335 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 ZNF43P17038 809 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 EDNRAP25101 427 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 SERPINA4P29622 427 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 AQP1P29972 269 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 BUD31P41223 144 aaPredicted RBP5.54□□□□□ -1.52
PTPN9-204ENST00000564970 GALR1P47211 349 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 REG1BP48304 166 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 TAS2R30P59541 319 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 RND3P61587 244 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 HERV-K104P63124 156 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 ARG2P78540 354 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 MRPS34P82930 218 aaKnown RBP5.54□□□□□ -1.52
PTPN9-204ENST00000564970 HIST1H1AQ02539 215 aaPredicted RBP5.54□□□□□ -1.52
PTPN9-204ENST00000564970 PDE7AQ13946 482 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 GGTLC2Q14390 218 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 INSL4Q14641 139 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 ICAM4Q14773 271 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 PDGFRLQ15198 375 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 MSMO1Q15800 293 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 HLA-BQ31612 363 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 Q499Y3 187 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 TP53I3Q53FA7 332 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 FAM78BQ5VT40 261 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 KIAA0895LQ68EN5 471 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 TMEM42Q69YG0 159 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 SP5Q6BEB4 398 aaPredicted RBP5.54□□□□□ -1.52
PTPN9-204ENST00000564970 RTL6Q6ICC9 239 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 UFSP1Q6NVU6 142 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 TMEM184AQ6ZMB5 413 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 TMEM182Q6ZP80 229 aaPredicted RBP5.54□□□□□ -1.52
PTPN9-204ENST00000564970 FOXI2Q6ZQN5 318 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 ESPNLQ6ZVH7 1005 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 BCDIN3DQ7Z5W3 292 aaKnown RBP5.54□□□□□ -1.52
PTPN9-204ENST00000564970 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.54□□□□□ -1.52
PTPN9-204ENST00000564970 UBALD2Q8IYN6 164 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 DEFB106AQ8N104 65 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 ARHGEF39Q8N4T4 335 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 SIGLECL1Q8N7X8 197 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 ZNF709Q8N972 641 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 OR10P1Q8NGE3 313 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 OR51T1Q8NGJ9 327 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 OR10S1Q8NGN2 331 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 OR1N2Q8NGR9 330 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 OR10X1Q8NGY0 326 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 OR52E5Q8NH55 327 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 ZNF418Q8TF45 676 aaPredicted RBP5.54□□□□□ -1.52
PTPN9-204ENST00000564970 HMGB4Q8WW32 186 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 GALMQ96C23 342 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 ZNF681Q96N22 645 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 GPR82Q96P67 336 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 AP1S3Q96PC3 154 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 DERL3Q96Q80 235 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 TIMP4Q99727 224 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 PTPN18Q99952 460 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 CHRDL1Q9BU40 450 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 HINT2Q9BX68 163 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 TPSD1Q9BZJ3 242 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 CST11Q9H112 138 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 OR51I2Q9H344 312 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 ISG20L2Q9H9L3 353 aaKnown RBP5.54□□□□□ -1.52
PTPN9-204ENST00000564970 ST20Q9HBF5 79 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 BCL2L10Q9HD36 194 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 HINT3Q9NQE9 182 aaKnown RBP5.54□□□□□ -1.52
PTPN9-204ENST00000564970 C1orf123Q9NWV4 160 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 MARCH4Q9P2E8 410 aaPredicted RBP5.54□□□□□ -1.52
PTPN9-204ENST00000564970 MRM2Q9UI43 246 aaKnown RBP5.54□□□□□ -1.52
PTPN9-204ENST00000564970 LAMP3Q9UQV4 416 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 WDR45Q9Y484 360 aa5.54□□□□□ -1.52
PTPN9-204ENST00000564970 LOC102723971A0A1B0GUV8 181 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 C13orf42A0A1B0GVH6 325 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 PSMB11A5LHX3 300 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 ANTXRLA6NF34 631 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 SLC22A20A6NK97 555 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 RIIAD1A6NNX1 92 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 DIRC3C9JPN6 131 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 TAX1BP3O14907 124 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 KLF4O43474 513 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 DUSP11O75319 330 aaKnown RBP5.53□□□□□ -1.52
PTPN9-204ENST00000564970 S1PR2O95136 353 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 SLC2A10O95528 541 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 CGAP01215 116 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 DBHP09172 617 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 PNMTP11086 282 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 NID1P14543 1247 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 CD22P20273 847 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 NTSR1P30989 418 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 ACVR1BP36896 505 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 FRKP42685 505 aaPredicted RBP5.53□□□□□ -1.52
PTPN9-204ENST00000564970 TCL1AP56279 114 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 YPEL3P61236 119 aaPredicted RBP5.53□□□□□ -1.52
PTPN9-204ENST00000564970 RHOBP62745 196 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 ZNF117Q03924 483 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 FOXL1Q12952 345 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.53□□□□□ -1.52
PTPN9-204ENST00000564970 ZNF585BQ52M93 769 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 GCSAMLQ5JQS6 135 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 VAX1Q5SQQ9 334 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 FAM162BQ5T6X4 162 aa5.53□□□□□ -1.52
PTPN9-204ENST00000564970 FAM27D1Q5T7N8 215 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms