RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 WNT4P56705 351 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 PRSS12P56730 875 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 GABARAPL2P60520 117 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 OR8B8Q15620 311 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 CCDC58Q4VC31 144 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 TMEM244Q5VVB8 128 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 RPL22L1Q6P5R6 122 aaKnown RBP12.97□□□□□ -0.33
RNF40-205ENST00000563909 PRSS48Q7RTY5 328 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 PRSS35Q8N3Z0 413 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 FTMTQ8N4E7 242 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 NANOGP1Q8N7R0 232 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 CITED2Q99967 270 aaPredicted RBP12.97□□□□□ -0.33
RNF40-205ENST00000563909 MND1Q9BWT6 205 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 SMURF1Q9HCE7 757 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 TRIM36Q9NQ86 728 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 MRPL15Q9P015 296 aaKnown RBP12.97□□□□□ -0.33
RNF40-205ENST00000563909 FRRS1LQ9P0K9 344 aa12.97□□□□□ -0.33
RNF40-205ENST00000563909 MRPS14O60783 128 aaKnown RBP12.96□□□□□ -0.33
RNF40-205ENST00000563909 DHRS3O75911 302 aa12.96□□□□□ -0.33
RNF40-205ENST00000563909 HLA-DPB1P04440 258 aa12.96□□□□□ -0.33
RNF40-205ENST00000563909 KIR3DL2P43630 455 aa12.96□□□□□ -0.33
RNF40-205ENST00000563909 GATA4P43694 442 aa12.96□□□□□ -0.33
RNF40-205ENST00000563909 TAS2R43P59537 309 aa12.96□□□□□ -0.33
RNF40-205ENST00000563909 NANOS3P60323 173 aaKnown RBP12.96□□□□□ -0.33
RNF40-205ENST00000563909 PRB3Q04118 309 aaPredicted RBP12.96□□□□□ -0.33
RNF40-205ENST00000563909 RIPPLY1Q0D2K3 151 aa12.96□□□□□ -0.33
RNF40-205ENST00000563909 ODF4Q2M2E3 257 aa12.96□□□□□ -0.33
RNF40-205ENST00000563909 BTN2A1Q7KYR7 527 aa12.96□□□□□ -0.33
RNF40-205ENST00000563909 PLPP7Q8NBV4 271 aa12.96□□□□□ -0.33
RNF40-205ENST00000563909 OR11L1Q8NGX0 322 aa12.96□□□□□ -0.33
RNF40-205ENST00000563909 CCDC90BQ9GZT6 254 aa12.96□□□□□ -0.33
RNF40-205ENST00000563909 COMMD4Q9H0A8 199 aa12.96□□□□□ -0.33
RNF40-205ENST00000563909 DNAH7Q8WXX0 4024 aa12.96□□□□□ -0.34
RNF40-205ENST00000563909 TRBV2A0A0J9YWF9 115 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 LCE6AA0A183 80 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 A0A1B0GTI1 187 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 TMEM212A6NML5 194 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 OR4C45A6NMZ5 311 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 E9PI62 339 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 H3BUX3 64 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 NPFFO15130 113 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 ADAM20O43506 726 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 SYT7O43581 403 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 GMDSO60547 372 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 ISG15P05161 165 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 CCL1P22362 96 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 HOXA4Q00056 320 aaPredicted RBP12.95□□□□□ -0.34
RNF40-205ENST00000563909 MAB21L1Q13394 359 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 IRF3Q14653 427 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 LY6EQ16553 131 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 Q6ZSR3 168 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 RNF144BQ7Z419 303 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 ZNF676Q8N7Q3 588 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 ZNF485Q8NCK3 441 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 Q8TCH9 128 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 ERGIC1Q969X5 290 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 RANBP3Q9H6Z4 567 aaPredicted RBP12.95□□□□□ -0.34
RNF40-205ENST00000563909 ABCB9Q9NP78 766 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 DNAJB11Q9UBS4 358 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 V9GYS6 101 aa12.95□□□□□ -0.34
RNF40-205ENST00000563909 A0A1B0GWJ7 208 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 MEIOCA2RUB1 952 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 DHRS7CA6NNS2 312 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 OGG1O15527 345 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 CST4P01036 141 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 MT-ND2P03891 347 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 CA6P23280 308 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 ACKR3P25106 362 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 HOXD3P31249 432 aaPredicted RBP12.94□□□□□ -0.34
RNF40-205ENST00000563909 GNALP38405 381 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 GTF2A1P52655 376 aaPredicted RBP12.94□□□□□ -0.34
RNF40-205ENST00000563909 MZT1Q08AG7 82 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 CDK5R1Q15078 307 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 OR8G1Q15617 311 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 KCNJ8Q15842 424 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 DMRTC1Q5HYR2 192 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 SFRP4Q6FHJ7 346 aaPredicted RBP12.94□□□□□ -0.34
RNF40-205ENST00000563909 KRT74Q7RTS7 529 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 CELF2-AS1Q8N7Q2 184 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 OR14K1Q8NGZ2 314 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 OR5AK2Q8NH90 309 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 UFSP2Q9NUQ7 469 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 ENPP5Q9UJA9 477 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 HHLA2Q9UM44 414 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 PIGLQ9Y2B2 252 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 MAB21L2Q9Y586 359 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 MPC1Q9Y5U8 109 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 KPTNQ9Y664 436 aa12.94□□□□□ -0.34
RNF40-205ENST00000563909 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.93□□□□□ -0.34
RNF40-205ENST00000563909 LOC107986453A0A1B0GWG9 222 aa12.93□□□□□ -0.34
RNF40-205ENST00000563909 ECDO95905 644 aaPredicted RBP12.93□□□□□ -0.34
RNF40-205ENST00000563909 BDH1Q02338 343 aa12.93□□□□□ -0.34
RNF40-205ENST00000563909 GUCA2AQ02747 115 aa12.93□□□□□ -0.34
RNF40-205ENST00000563909 ACSM1Q08AH1 577 aa12.93□□□□□ -0.34
RNF40-205ENST00000563909 EGFEM1PQ0D2K5 195 aa12.93□□□□□ -0.34
RNF40-205ENST00000563909 SPHARQ15513 63 aa12.93□□□□□ -0.34
RNF40-205ENST00000563909 MPPED2Q15777 294 aa12.93□□□□□ -0.34
RNF40-205ENST00000563909 PRAMEF6Q5VXH4 476 aa12.93□□□□□ -0.34
RNF40-205ENST00000563909 METAP1DQ6UB28 335 aaPredicted RBP12.93□□□□□ -0.34
RNF40-205ENST00000563909 RDH10Q8IZV5 341 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms