RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 GDNFP39905 211 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 CAPZA1P52907 286 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 GNG3P63215 75 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 RPL13AP3Q6NVV1 102 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 RASSF6Q6ZTQ3 369 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 KCTD8Q6ZWB6 473 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 CENPVQ7Z7K6 275 aaPredicted RBP8.18□□□□□ -1.1
SF3B3-204ENST00000563739 HS3ST5Q8IZT8 346 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 OSR2Q8N2R0 312 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 PQLC1Q8N2U9 271 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 ZNF561Q8N587 486 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 OR4X2Q8NGF9 303 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 OR52L1Q8NGH7 329 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 RBMXL1Q96E39 390 aaKnown RBP8.18□□□□□ -1.1
SF3B3-204ENST00000563739 PGAM5Q96HS1 289 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 RAX2Q96IS3 184 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 FEVQ99581 238 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 NIPSNAP1Q9BPW8 284 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 ZNF649Q9BS31 505 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 OR10A2Q9H208 303 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 VCX3BQ9H321 246 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 RGCCQ9H4X1 137 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 IL20Q9NYY1 176 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 SCOCQ9UIL1 159 aa8.18□□□□□ -1.1
SF3B3-204ENST00000563739 KIAA2026Q5HYC2 2103 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 K7N7A8 449 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 GLCEO94923 617 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 ZFPL1O95159 310 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 SOX14O95416 240 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 CFL1P23528 166 aaKnown RBP8.17□□□□□ -1.1
SF3B3-204ENST00000563739 MPZP25189 248 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 CHATP28329 748 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 PSMA6P60900 246 aaKnown RBP8.17□□□□□ -1.1
SF3B3-204ENST00000563739 ACTA2P62736 377 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 ACTG2P63267 376 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 ACTC1P68032 377 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 ACTA1P68133 377 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 TAF13Q15543 124 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 CEACAM21Q3KPI0 293 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 ARSJQ5FYB0 599 aaPredicted RBP8.17□□□□□ -1.1
SF3B3-204ENST00000563739 KHDC1LQ5JSQ8 128 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 OGFRL1Q5TC84 451 aaPredicted RBP8.17□□□□□ -1.1
SF3B3-204ENST00000563739 MINOS1Q5TGZ0 78 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 CD300LDQ6UXZ3 194 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 C16orf82Q7Z2V1 217 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 ZNF329Q86UD4 541 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 SBSPONQ8IVN8 264 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 OR13D1Q8NGV5 346 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 OR6N2Q8NGY6 317 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 NRBF2Q96F24 287 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 NOL4LQ96MY1 436 aaPredicted RBP8.17□□□□□ -1.1
SF3B3-204ENST00000563739 RBM14Q96PK6 669 aaKnown RBP8.17□□□□□ -1.1
SF3B3-204ENST00000563739 RCHY1Q96PM5 261 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 SLC25A33Q9BSK2 321 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 GPR61Q9BZJ8 451 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 GABARAPL1Q9H0R8 117 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 ABCB9Q9NP78 766 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 MINOS1-NBL1R4GNA1 71 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 KMT2AQ03164 3969 aa8.17□□□□□ -1.1
SF3B3-204ENST00000563739 FAM183AA6NL82 134 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 J3QT63 122 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 SELENOFO60613 162 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 OR2F2O95006 317 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 IGLV1-47P01700 117 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 ANXA8P13928 327 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 HSD11B1P28845 292 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 MYCNOSP40205 109 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 DCTN2Q13561 401 aaKnown RBP8.16□□□□□ -1.1
SF3B3-204ENST00000563739 SMIM21Q3B7S5 101 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 LPCAT4Q643R3 524 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 TMEM42Q69YG0 159 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 FAHD1Q6P587 224 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 ERI1Q8IV48 349 aaKnown RBP8.16□□□□□ -1.1
SF3B3-204ENST00000563739 TPRX1Q8N7U7 411 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 OR6K6Q8NGW6 343 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 SORL1Q92673 2214 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 DPF1Q92782 380 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 CENPNQ96H22 339 aaPredicted RBP8.16□□□□□ -1.1
SF3B3-204ENST00000563739 INTS14Q96SY0 518 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 ZNF184Q99676 751 aaPredicted RBP8.16□□□□□ -1.1
SF3B3-204ENST00000563739 ZNF556Q9HAH1 456 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 FAM206AQ9NX38 181 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 RASL12Q9NYN1 266 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 PLA2G2EQ9NZK7 142 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 IL36RNQ9UBH0 155 aa8.16□□□□□ -1.1
SF3B3-204ENST00000563739 PQLC2LA1A4F0 135 aa8.15□□□□□ -1.1
SF3B3-204ENST00000563739 OR5B21A6NL26 309 aa8.15□□□□□ -1.1
SF3B3-204ENST00000563739 G3V2T6 193 aa8.15□□□□□ -1.1
SF3B3-204ENST00000563739 H3BN98 237 aa8.15□□□□□ -1.1
SF3B3-204ENST00000563739 LY6LH3BQJ8 138 aa8.15□□□□□ -1.1
SF3B3-204ENST00000563739 SLC1A7O00341 560 aa8.15□□□□□ -1.1
SF3B3-204ENST00000563739 RPSAP08865 295 aaKnown RBP8.15□□□□□ -1.1
SF3B3-204ENST00000563739 PEX2P28328 305 aa8.15□□□□□ -1.1
SF3B3-204ENST00000563739 SLC15A1P46059 708 aa8.15□□□□□ -1.1
SF3B3-204ENST00000563739 DYNC1I2Q13409 638 aaKnown RBP8.15□□□□□ -1.1
SF3B3-204ENST00000563739 DEFB136Q30KP8 78 aa8.15□□□□□ -1.1
SF3B3-204ENST00000563739 IZUMO2Q6UXV1 221 aa8.15□□□□□ -1.1
SF3B3-204ENST00000563739 ADAMTSL5Q6ZMM2 481 aa8.15□□□□□ -1.1
SF3B3-204ENST00000563739 AMIGO2Q86SJ2 522 aa8.15□□□□□ -1.1
SF3B3-204ENST00000563739 OR2T33Q8NG76 320 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms