RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 EIF1P41567 113 aaKnown RBP3.58□□□□□ -1.84
SMG1-204ENST00000561940 IFITM3Q01628 133 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 HNRNPA1L2Q32P51 320 aaKnown RBP3.58□□□□□ -1.84
SMG1-204ENST00000561940 SLC25A35Q3KQZ1 300 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 TEX30Q5JUR7 227 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 ERO1BQ86YB8 467 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 DAW1Q8N136 415 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 DRAM1Q8N682 238 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 OR5T1Q8NG75 326 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 C17orf50Q8WW18 174 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 CACNG8Q8WXS5 425 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 CPNE4Q96A23 557 aaPredicted RBP3.58□□□□□ -1.84
SMG1-204ENST00000561940 ZBED3Q96IU2 234 aaPredicted RBP3.58□□□□□ -1.84
SMG1-204ENST00000561940 RDH12Q96NR8 316 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 ARV1Q9H2C2 271 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 OR51B5Q9H339 312 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 ARMC7Q9H6L4 198 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 LZTFL1Q9NQ48 299 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 GGA2Q9UJY4 613 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 SIGLEC9Q9Y336 463 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 KLF12Q9Y4X4 402 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 MYO3BQ8WXR4 1341 aa3.58□□□□□ -1.84
SMG1-204ENST00000561940 A0A0J9YYE9 177 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 K7EM74 188 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 M0R1X1 148 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 SMC2O95347 1197 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 PLEKHA8P1O95397 391 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 SVILO95425 2214 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 IGLV2-8P01709 118 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 TRBC1P01850 177 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 COL1A1P02452 1464 aaPredicted RBP3.57□□□□□ -1.84
SMG1-204ENST00000561940 PTNP21246 168 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 ATP5J2P56134 94 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 TAS2R39P59534 338 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 RPL18AQ02543 176 aaKnown RBP3.57□□□□□ -1.84
SMG1-204ENST00000561940 ZNF816Q0VGE8 651 aaPredicted RBP3.57□□□□□ -1.84
SMG1-204ENST00000561940 C6orf183Q5T699 404 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 RIF1Q5UIP0 2472 aaKnown RBP3.57□□□□□ -1.84
SMG1-204ENST00000561940 AP1ARQ63HQ0 302 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 STEAP4Q687X5 459 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 MDP1Q86V88 176 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 ZNF615Q8N8J6 731 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 DCAKDQ8WVC6 231 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 TMEM234Q8WY98 164 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 TMEM159Q96B96 161 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 DOK1Q99704 481 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 TMEM175Q9BSA9 504 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 NUDT9Q9BW91 350 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 UPF3BQ9BZI7 483 aaKnown RBP3.57□□□□□ -1.84
SMG1-204ENST00000561940 ZFHX2Q9C0A1 2572 aaPredicted RBP3.57□□□□□ -1.84
SMG1-204ENST00000561940 SPTBN4Q9H254 2564 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 GAL3ST2Q9H3Q3 398 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 EXOSC4Q9NPD3 245 aaKnown RBP3.57□□□□□ -1.84
SMG1-204ENST00000561940 TREX1Q9NSU2 369 aa3.57□□□□□ -1.84
SMG1-204ENST00000561940 NDRG2Q9UN36 371 aaKnown RBP3.57□□□□□ -1.84
SMG1-204ENST00000561940 RGPD2P0DJD1 1756 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 ABCC12Q96J65 1359 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 IGHV3-49A0A0A0MS15 119 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 ARL2P36404 184 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 HCCSP53701 268 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 KRTAP10-1P60331 282 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 XIAPP98170 497 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 NAB1Q13506 487 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 PIGHQ14442 188 aaPredicted RBP3.56□□□□□ -1.84
SMG1-204ENST00000561940 NDUFAF6Q330K2 333 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 SLC25A25Q6KCM7 469 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 TMPRSS11AQ6ZMR5 421 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 OSR2Q8N2R0 312 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 OR13G1Q8NGZ3 307 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 MITD1Q8WV92 249 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 RHBDL2Q9NX52 303 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 C21orf62Q9NYP8 219 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 ENOPH1Q9UHY7 261 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 VAX2Q9UIW0 290 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 FLVCR2Q9UPI3 526 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 LRRC42Q9Y546 428 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 ACACBO00763 2458 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 TRANK1O15050 2925 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 TJP1Q07157 1748 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 ANKRD26Q9UPS8 1709 aa3.56□□□□□ -1.84
SMG1-204ENST00000561940 IGKV6-21A0A0C4DH24 114 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 ZNF850A8MQ14 1090 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 MANBAO00462 879 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 HOXB8P17481 243 aaPredicted RBP3.55□□□□□ -1.84
SMG1-204ENST00000561940 CXCR1P25024 350 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 APLNRP35414 380 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 NUP62P37198 522 aaPredicted RBP3.55□□□□□ -1.84
SMG1-204ENST00000561940 CMC4P56277 68 aaPredicted RBP3.55□□□□□ -1.84
SMG1-204ENST00000561940 SLC35B1P78383 322 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 INCA1Q0VD86 236 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 DMC1Q14565 340 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 LY6EQ16553 131 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 YIF1BQ5BJH7 314 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 C16orf87Q6PH81 154 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 EPGNQ6UW88 154 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 ZNF101Q8IZC7 436 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 ASCC1Q8N9N2 400 aaKnown RBP3.55□□□□□ -1.84
SMG1-204ENST00000561940 OR1L1Q8NH94 360 aa3.55□□□□□ -1.84
SMG1-204ENST00000561940 FAM131CQ96AQ9 280 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms