RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 Q8IYB0 196 aa10.84□□□□□ -0.67
SMAD3-213ENST00000560175 CMTM4Q8IZR5 234 aa10.84□□□□□ -0.67
SMAD3-213ENST00000560175 PIP4P2Q8N4L2 257 aa10.84□□□□□ -0.67
SMAD3-213ENST00000560175 ZNF676Q8N7Q3 588 aa10.84□□□□□ -0.67
SMAD3-213ENST00000560175 OR5AK2Q8NH90 309 aa10.84□□□□□ -0.67
SMAD3-213ENST00000560175 CYGBQ8WWM9 190 aa10.84□□□□□ -0.67
SMAD3-213ENST00000560175 TFAP2CQ92754 450 aa10.84□□□□□ -0.67
SMAD3-213ENST00000560175 GGHQ92820 318 aa10.84□□□□□ -0.67
SMAD3-213ENST00000560175 LHX4Q969G2 390 aa10.84□□□□□ -0.67
SMAD3-213ENST00000560175 RHOFQ9HBH0 211 aa10.84□□□□□ -0.67
SMAD3-213ENST00000560175 TRBV2A0A0J9YWF9 115 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 RNASEK-C17orf49H0YIS7 233 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 SLC1A7O00341 560 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 NDUFB7P17568 137 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 NPBWR2P48146 333 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 MTCP1P56278 107 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 ZNF146Q15072 292 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 CDK5R1Q15078 307 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 RUSC1-AS1Q66K80 236 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 TMEM200BQ69YZ2 307 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 XAF1Q6GPH4 301 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 ASPHD2Q6ICH7 369 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 HCP5Q6MZN7 132 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 RNF144BQ7Z419 303 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 SAXO1Q8IYX7 474 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 TMEM86BQ8N661 226 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 TMEM185AQ8NFB2 350 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 OR5D14Q8NGL3 314 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 OR13C3Q8NGS6 347 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 TBC1D15Q8TC07 691 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 H1FXQ92522 213 aaKnown RBP10.83□□□□□ -0.68
SMAD3-213ENST00000560175 RGP1Q92546 391 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-213ENST00000560175 TMEM80Q96HE8 168 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 OPALINQ96PE5 141 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 PDCD1LG2Q9BQ51 273 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 ZCCHC4Q9H5U6 513 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 METTL8Q9H825 291 aaKnown RBP10.83□□□□□ -0.68
SMAD3-213ENST00000560175 FKBP14Q9NWM8 211 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 BABAM2Q9NXR7 383 aa10.83□□□□□ -0.68
SMAD3-213ENST00000560175 CNOT2Q9NZN8 540 aaKnown RBP10.83□□□□□ -0.68
SMAD3-213ENST00000560175 NKX1-2Q9UD57 310 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-213ENST00000560175 EXOSC1Q9Y3B2 195 aaKnown RBP10.83□□□□□ -0.68
SMAD3-213ENST00000560175 SIRT4Q9Y6E7 314 aaPredicted RBP10.83□□□□□ -0.68
SMAD3-213ENST00000560175 IGKV1-12A0A0C4DH73 117 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 MDFIC2A0A1B0GVS7 189 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 IGKV1D-12P01611 117 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 ZNF20P17024 532 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 CEBPDP49716 269 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-213ENST00000560175 UBE2E1P51965 193 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 GUCA2AQ02747 115 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 SLC34A1Q06495 639 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 OR2G6Q5TZ20 316 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 C16orf87Q6PH81 154 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 TMPRSS11AQ6ZMR5 421 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 LDLRAD3Q86YD5 345 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 C8orf59Q8N0T1 100 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-213ENST00000560175 ZSCAN4Q8NAM6 433 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-213ENST00000560175 OR52N1Q8NH53 320 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 SLAMF9Q96A28 289 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 SLC25A28Q96A46 364 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 COMMD4Q9H0A8 199 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 ELL3Q9HB65 397 aaPredicted RBP10.82□□□□□ -0.68
SMAD3-213ENST00000560175 C19orf12Q9NSK7 152 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 ONECUT1Q9UBC0 465 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 CLEC2DQ9UHP7 191 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 PSORS1C1Q9UIG5 152 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 POMT1Q9Y6A1 747 aa10.82□□□□□ -0.68
SMAD3-213ENST00000560175 FBN3Q75N90 2809 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 HOXA3O43365 443 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-213ENST00000560175 KDM4BO94953 1096 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 LALBAP00709 142 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 MELTFP08582 738 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 LMO1P25800 156 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 DLX6P56179 175 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 ZP1P60852 638 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 RPL31P62899 125 aaKnown RBP10.81□□□□□ -0.68
SMAD3-213ENST00000560175 COL10A1Q03692 680 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 ACSM1Q08AH1 577 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 ST3GAL4Q11206 333 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 NCR3LG1Q68D85 454 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 DMKNQ6E0U4 476 aaPredicted RBP10.81□□□□□ -0.68
SMAD3-213ENST00000560175 C17orf107Q6ZR85 190 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 FAM58AQ8N1B3 248 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 Q8NFD4 153 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 OR5D13Q8NGL4 314 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 OR13C9Q8NGT0 318 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 NRG4Q8WWG1 115 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 AJUBAQ96IF1 538 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 SNX22Q96L94 193 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 HMG20AQ9NP66 347 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 SIRT7Q9NRC8 400 aa10.81□□□□□ -0.68
SMAD3-213ENST00000560175 TMEM82A0PJX8 343 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 EFCAB10A6NFE3 127 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 C17orf98A8MV24 154 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 SULT1B1O43704 296 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 GPX5O75715 221 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 ALDOBP05062 364 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 CD1AP06126 327 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 BCL3P20749 454 aa10.8□□□□□ -0.68
SMAD3-213ENST00000560175 IER3P46695 156 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms