RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 SLC16A13Q7RTY0 426 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 C1orf210Q8IVY1 113 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 SPEM1Q8N4L4 309 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 ZNF799Q96GE5 643 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 ZNF318Q5VUA4 2279 aa14.2□□□□□ -0.14
SHMT2-232ENST00000557487 LINC00587B1AMM8 73 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 ONECUT2O95948 504 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 MTCP1P56278 107 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 RSU1Q15404 277 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 TMEM176BQ3YBM2 270 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-232ENST00000557487 FBXW12Q6X9E4 464 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 RBMS3Q6XE24 437 aaKnown RBP14.19□□□□□ -0.14
SHMT2-232ENST00000557487 FAM185AQ8N0U4 392 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 TMEM156Q8N614 296 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 OR10G3Q8NGC4 313 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 HPSE2Q8WWQ2 592 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 GNRHR2Q96P88 292 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 IP6K3Q96PC2 410 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 WDR77Q9BQA1 342 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-232ENST00000557487 WFDC1Q9HC57 220 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 C19orf25Q9UFG5 118 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-232ENST00000557487 AK3Q9UIJ7 227 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 PTRH2Q9Y3E5 179 aaKnown RBP14.19□□□□□ -0.14
SHMT2-232ENST00000557487 SEC16AO15027 2179 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 K7N7A8 449 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 CDS2O95674 445 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 AKR1C3P42330 323 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 H3F3AP84243 136 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 SHBQ15464 509 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 FAM69BQ5VUD6 431 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 LHFPL2Q6ZUX7 228 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 CPEB2Q7Z5Q1 589 aaKnown RBP14.19□□□□□ -0.14
SHMT2-232ENST00000557487 ZNF565Q8N9K5 539 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 PRSS33Q8NF86 280 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 ARID1BQ8NFD5 2236 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-232ENST00000557487 PIGTQ969N2 578 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 NABP1Q96AH0 204 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 MSI2Q96DH6 328 aaKnown RBP14.19□□□□□ -0.14
SHMT2-232ENST00000557487 SPACA9Q96E40 222 aaPredicted RBP14.19□□□□□ -0.14
SHMT2-232ENST00000557487 ZNF286AQ9HBT8 521 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 IL36GQ9NZH8 169 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 ZNF391Q9UJN7 358 aa14.19□□□□□ -0.14
SHMT2-232ENST00000557487 TP53I11O14683 189 aa14.18□□□□□ -0.14
SHMT2-232ENST00000557487 DHHO43323 396 aa14.18□□□□□ -0.14
SHMT2-232ENST00000557487 SFTPDP35247 375 aa14.18□□□□□ -0.14
SHMT2-232ENST00000557487 AFF3P51826 1226 aaKnown RBP14.18□□□□□ -0.14
SHMT2-232ENST00000557487 POLR2GP62487 172 aaKnown RBP eCLIP14.18□□□□□ -0.14
SHMT2-232ENST00000557487 TCF15Q12870 199 aa14.18□□□□□ -0.14
SHMT2-232ENST00000557487 SOHLH1Q5JUK2 328 aa14.18□□□□□ -0.14
SHMT2-232ENST00000557487 MAML2Q8IZL2 1156 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-232ENST00000557487 MOB3AQ96BX8 217 aa14.18□□□□□ -0.14
SHMT2-232ENST00000557487 MARS2Q96GW9 593 aaKnown RBP14.18□□□□□ -0.14
SHMT2-232ENST00000557487 TPSD1Q9BZJ3 242 aa14.18□□□□□ -0.14
SHMT2-232ENST00000557487 BCO1Q9HAY6 547 aa14.18□□□□□ -0.14
SHMT2-232ENST00000557487 SLC2A9Q9NRM0 540 aa14.18□□□□□ -0.14
SHMT2-232ENST00000557487 TCFL5Q9UL49 500 aa14.18□□□□□ -0.14
SHMT2-232ENST00000557487 TRIOO75962 3097 aa14.18□□□□□ -0.14
SHMT2-232ENST00000557487 LINC01387J3KSC0 135 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 OR8U8P0C7N1 319 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 SUMF2Q8NBJ7 301 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 OR4D5Q8NGN0 318 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 CD300LFQ8TDQ1 290 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 TOMM40LQ969M1 308 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 CYYR1Q96J86 154 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 SPIN2AQ99865 258 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 SPIN2BQ9BPZ2 258 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 HDHD3Q9BSH5 251 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-232ENST00000557487 FAAP24Q9BTP7 215 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 ZDBF2Q9HCK1 2354 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 A0A087WWC5 75 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 C5orf63A6NC05 138 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 TERTO14746 1132 aaKnown RBP14.17□□□□□ -0.14
SHMT2-232ENST00000557487 LAMTOR5O43504 91 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 RAMP1O60894 148 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 DKK1O94907 266 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 CBR1P16152 277 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 RSPO1Q2MKA7 263 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-232ENST00000557487 LYZL2Q7Z4W2 148 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 ISOC2Q96AB3 205 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 YPEL4Q96NS1 127 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 RSRP1Q9BUV0 290 aa14.17□□□□□ -0.14
SHMT2-232ENST00000557487 A0A1W2PPE3 182 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 OR5H15A6NDH6 313 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 GATCO43716 136 aaKnown RBP14.16□□□□□ -0.14
SHMT2-232ENST00000557487 PITX3O75364 302 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 OR2J2O76002 312 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 HOXA6P31267 233 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 CXCL12P48061 93 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 MRPS34P82930 218 aaKnown RBP14.16□□□□□ -0.14
SHMT2-232ENST00000557487 RAB35Q15286 201 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 HIKESHIQ53FT3 197 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 FAM27BQ5VT28 67 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 TMEM123Q8N131 208 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 FAM24BQ8N5W8 94 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 DEFB119Q8N690 84 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 WDSUB1Q8N9V3 476 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 SGK3Q96BR1 496 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 BSCL2Q96G97 398 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-232ENST00000557487 BOD1Q96IK1 185 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 SLC25A31Q9H0C2 315 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms