RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 NOS1APO75052 506 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-210ENST00000557431 ZNF737O75373 536 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 IGHA1P01876 353 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 PF4P02776 101 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 OSMP13725 252 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 SNU13P55769 128 aaKnown RBP11.28□□□□□ -0.6
SLIRP-210ENST00000557431 BNIP1Q12981 228 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 KHDC1LQ5JSQ8 128 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 KCTD18Q6PI47 426 aaPredicted RBP11.28□□□□□ -0.6
SLIRP-210ENST00000557431 ZNF573Q86YE8 665 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 ZNF679Q8IYX0 411 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 ADGRG5Q8IZF4 528 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 ZNF676Q8N7Q3 588 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 OR11H6Q8NGC7 330 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 ZNF714Q96N38 554 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 CHID1Q9BWS9 393 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 CADM1Q9BY67 442 aaKnown RBP11.28□□□□□ -0.6
SLIRP-210ENST00000557431 YIPF3Q9GZM5 350 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 CHST6Q9GZX3 395 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 PITPNC1Q9UKF7 332 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 V9GYS6 101 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 TCRBV4S1A1TA0A5B7 111 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 AQP12BA6NM10 295 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 GNGT2O14610 69 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 DNAJC8O75937 253 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-210ENST00000557431 HMGN1P05114 100 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 RAP2AP10114 183 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 ATP6V1B1P15313 513 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 DUSP1P28562 367 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 OR12D2P58182 307 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 CXCR4P61073 352 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 ERVK11-1P61568 191 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 SNAPC1Q16533 368 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 ZNF829Q3KNS6 432 aaPredicted RBP11.27□□□□□ -0.61
SLIRP-210ENST00000557431 TMEM42Q69YG0 159 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 GDPD3Q7L5L3 318 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 AQP12AQ8IXF9 295 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 WFDC9Q8NEX5 89 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 OR52N4Q8NGI2 321 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 CANT1Q8WVQ1 401 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 MYDGFQ969H8 173 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 MTCH1Q9NZJ7 389 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 POLDIP2Q9Y2S7 368 aa11.27□□□□□ -0.61
SLIRP-210ENST00000557431 IGHV2-26A0A0B4J1V2 119 aa11.26□□□□□ -0.61
SLIRP-210ENST00000557431 ARRDC5A6NEK1 342 aa11.26□□□□□ -0.61
SLIRP-210ENST00000557431 ACOD1A6NK06 481 aa11.26□□□□□ -0.61
SLIRP-210ENST00000557431 PRKYO43930 277 aa11.26□□□□□ -0.61
SLIRP-210ENST00000557431 E2F6O75461 281 aa11.26□□□□□ -0.61
SLIRP-210ENST00000557431 RPP14O95059 124 aaKnown RBP11.26□□□□□ -0.61
SLIRP-210ENST00000557431 LPLP06858 475 aa11.26□□□□□ -0.61
SLIRP-210ENST00000557431 MPZP25189 248 aa11.26□□□□□ -0.61
SLIRP-210ENST00000557431 ABCA11PQ4W5N1 156 aa11.26□□□□□ -0.61
SLIRP-210ENST00000557431 BCL2L15Q5TBC7 163 aa11.26□□□□□ -0.61
SLIRP-210ENST00000557431 ZNF322Q6U7Q0 402 aaPredicted RBP11.26□□□□□ -0.61
SLIRP-210ENST00000557431 SSX6Q7RTT6 188 aa11.26□□□□□ -0.61
SLIRP-210ENST00000557431 CENPVQ7Z7K6 275 aaPredicted RBP11.26□□□□□ -0.61
SLIRP-210ENST00000557431 TBX5Q99593 518 aa11.26□□□□□ -0.61
SLIRP-210ENST00000557431 SLC25A19Q9HC21 320 aa11.26□□□□□ -0.61
SLIRP-210ENST00000557431 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.26□□□□□ -0.61
SLIRP-210ENST00000557431 INPP5EQ9NRR6 644 aa11.26□□□□□ -0.61
SLIRP-210ENST00000557431 OR52A1Q9UKL2 312 aa11.26□□□□□ -0.61
SLIRP-210ENST00000557431 DLGAP1O14490 977 aa11.25□□□□□ -0.61
SLIRP-210ENST00000557431 CHRM2P08172 466 aa11.25□□□□□ -0.61
SLIRP-210ENST00000557431 GDNFP39905 211 aa11.25□□□□□ -0.61
SLIRP-210ENST00000557431 ROM1Q03395 351 aa11.25□□□□□ -0.61
SLIRP-210ENST00000557431 UBE2V2Q15819 145 aa11.25□□□□□ -0.61
SLIRP-210ENST00000557431 PRAMEF5Q5TYX0 476 aa11.25□□□□□ -0.61
SLIRP-210ENST00000557431 DEGS2Q6QHC5 323 aa11.25□□□□□ -0.61
SLIRP-210ENST00000557431 C18orf65Q6ZTR6 163 aa11.25□□□□□ -0.61
SLIRP-210ENST00000557431 SLC35F2Q8IXU6 374 aa11.25□□□□□ -0.61
SLIRP-210ENST00000557431 ELMOD2Q8IZ81 293 aa11.25□□□□□ -0.61
SLIRP-210ENST00000557431 OR8H2Q8N162 312 aa11.25□□□□□ -0.61
SLIRP-210ENST00000557431 DTX3Q8N9I9 347 aa11.25□□□□□ -0.61
SLIRP-210ENST00000557431 OR4P4Q8NGL7 312 aa11.25□□□□□ -0.61
SLIRP-210ENST00000557431 EMG1Q92979 244 aaKnown RBP11.25□□□□□ -0.61
SLIRP-210ENST00000557431 CNN2Q99439 309 aaKnown RBP11.25□□□□□ -0.61
SLIRP-210ENST00000557431 MRM2Q9UI43 246 aaKnown RBP11.25□□□□□ -0.61
SLIRP-210ENST00000557431 POMPQ9Y244 141 aa11.25□□□□□ -0.61
SLIRP-210ENST00000557431 R4GMQ9 66 aa11.25□□□□□ -0.61
SLIRP-210ENST00000557431 PSPNO60542 156 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 ATP5HO75947 161 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 CCDC159P0C7I6 412 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 HOXB6P17509 224 aaKnown RBP11.24□□□□□ -0.61
SLIRP-210ENST00000557431 NPBWR2P48146 333 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 RASSF2P50749 326 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 DYNLT3P51808 116 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 SLC35A2P78381 396 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 CBX1P83916 185 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 IL24Q13007 206 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 FLOT2Q14254 428 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 GK3PQ14409 553 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 GRK1Q15835 563 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 C9orf152Q5JTZ5 239 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 UTF1Q5T230 341 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 LCN1P1Q5VSP4 162 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 SLC25A26Q70HW3 274 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 SNX22Q96L94 193 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 CEP19Q96LK0 163 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 SLC25A33Q9BSK2 321 aa11.24□□□□□ -0.61
SLIRP-210ENST00000557431 PKIBQ9C010 78 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms