RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 GDPD3Q7L5L3 318 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 OR8H2Q8N162 312 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 OR2T6Q8NHC8 308 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 PPP1R35Q8TAP8 253 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 PP6455Q8WZ26 134 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 SLAMF9Q96A28 289 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 FOXRED1Q96CU9 486 aaPredicted RBP11.5□□□□□ -0.57
SNX6-210ENST00000557341 BORCS8Q96FH0 119 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 CENPNQ96H22 339 aaPredicted RBP11.5□□□□□ -0.57
SNX6-210ENST00000557341 OSBPL10Q9BXB5 764 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 NPFFR1Q9GZQ6 430 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 MTCH1Q9NZJ7 389 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 GNG8Q9UK08 70 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 KIAA2026Q5HYC2 2103 aa11.5□□□□□ -0.57
SNX6-210ENST00000557341 IGKV1-27A0A075B6S5 117 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 C17orf98A8MV24 154 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 ZNF737O75373 536 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 CIB2O75838 187 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 CSF1P09603 554 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 KIR2DS4P43632 304 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 DLX6P56179 175 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 ISL1P61371 349 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 ACTC1P68032 377 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 ACTA1P68133 377 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 CRIP3Q6Q6R5 217 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 SLC25A26Q70HW3 274 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 Q8IYB0 196 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 PRSS35Q8N3Z0 413 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 DTX3Q8N9I9 347 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 OR13D1Q8NGV5 346 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 EMG1Q92979 244 aaKnown RBP11.49□□□□□ -0.57
SNX6-210ENST00000557341 EME1Q96AY2 570 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 IMPAD1Q9NX62 359 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 SIGLEC9Q9Y336 463 aa11.49□□□□□ -0.57
SNX6-210ENST00000557341 TBL2Q9Y4P3 447 aaKnown RBP11.49□□□□□ -0.57
SNX6-210ENST00000557341 FAM90A8PA6NJQ4 464 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 SAC3D1A6NKF1 404 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 VGLL3A8MV65 326 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 ODF3BA8MYP8 253 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 F8VVB4 439 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 F8VWA3 439 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 CHST1O43916 411 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 CYB5AP00167 134 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 ARG1P05089 322 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 ZNF728P0DKX0 622 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 ZNF85Q03923 595 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 EDDM3AQ14507 147 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 TP53I3Q53FA7 332 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 ZNF626Q68DY1 528 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 LHFPL4Q7Z7J7 247 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 ENTHD1Q8IYW4 607 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 KLHDC1Q8N7A1 406 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 DNAAF1Q8NEP3 725 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 FAM110DQ8TAY7 271 aaPredicted RBP11.48□□□□□ -0.57
SNX6-210ENST00000557341 ZNF714Q96N38 554 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 ORC6Q9Y5N6 252 aa11.48□□□□□ -0.57
SNX6-210ENST00000557341 TRBV2A0A0J9YWF9 115 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 MEX3AA1L020 520 aaKnown RBP11.47□□□□□ -0.57
SNX6-210ENST00000557341 INMTO95050 263 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 HAND1O96004 215 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 IGHV1-8P0DP01 117 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 KIR3DL2P43630 455 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 RBP2P50120 134 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 ATP1B3P54709 279 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 MEF2CQ06413 473 aaPredicted RBP11.47□□□□□ -0.57
SNX6-210ENST00000557341 PLA1AQ53H76 456 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 TMEM244Q5VVB8 128 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 TCF23Q7RTU1 214 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 EGFL6Q8IUX8 553 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 OR11H6Q8NGC7 330 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 PIFOQ8TCI5 191 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 RPS4Y2Q8TD47 263 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 TRUB1Q8WWH5 349 aaKnown RBP11.47□□□□□ -0.57
SNX6-210ENST00000557341 SNX22Q96L94 193 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 NKX3-1Q99801 234 aaPredicted RBP11.47□□□□□ -0.57
SNX6-210ENST00000557341 ABCB10Q9NRK6 738 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 TCF19Q9Y242 345 aa11.47□□□□□ -0.57
SNX6-210ENST00000557341 hADV38S2A0JD32 116 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 ZNF20P17024 532 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 GABRR1P24046 479 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 AZGP1P25311 298 aaKnown RBP11.46□□□□□ -0.57
SNX6-210ENST00000557341 PEX2P28328 305 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 POU3F4P49335 361 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 ZNF91Q05481 1191 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 DYNC1I2Q13409 638 aaKnown RBP11.46□□□□□ -0.57
SNX6-210ENST00000557341 GRK1Q15835 563 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 FAM189A2Q15884 450 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 LHFPL2Q6ZUX7 228 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 UTS2BQ765I0 119 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 RDH10Q8IZV5 341 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 DYNAPQ8N1N2 210 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 OR2G2Q8NGZ5 317 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 CFHR4Q92496 578 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 MALSU1Q96EH3 234 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 ADAT3Q96EY9 351 aaPredicted RBP11.46□□□□□ -0.57
SNX6-210ENST00000557341 CDCA4Q9BXL8 241 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 CHST6Q9GZX3 395 aa11.46□□□□□ -0.57
SNX6-210ENST00000557341 SEBOXQ9HB31 216 aaPredicted RBP11.46□□□□□ -0.57
SNX6-210ENST00000557341 RBFOX1Q9NWB1 397 aaKnown RBP11.46□□□□□ -0.57
SNX6-210ENST00000557341 IL36RNQ9UBH0 155 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms