RNA–Protein interactions for RNA: ENST00000557320.5

PAPOLA-223, Transcript of poly(A) polymerase alpha, human

TSL 1 (best) BASIC

Gene PAPOLA, Length 3,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-223	ENST00000557320	MARCH3	Q86UD3	253 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	STPG4	Q8N801	248 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	DTWD2	Q8NBA8	298 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	ZNF738	Q8NE65	137 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	AQP7P3	A6NL99	342 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	ZNF878	C9JN71	531 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	TNFSF13	O75888	250 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	TRA2B	P62995	288 aa	Known RBP	13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	MRPS21	P82921	87 aa	Known RBP	13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	SLC48A1	Q6P1K1	146 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	FBXW12	Q6X9E4	464 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	MRPL52	Q86TS9	123 aa	Known RBP	13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	NKAIN3	Q8N8D7	197 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	ZCCHC14	Q8WYQ9	949 aa	Known RBP	13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	RNF2	Q99496	336 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	P4HTM	Q9NXG6	502 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	NSG1	A0A0A6YYJ2	146 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	CCDC163	A0A0D9SF12	145 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	ABHD16A	O95870	558 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	CD70	P32970	193 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	GALR1	P47211	349 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	RND2	P52198	227 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	TLE1	Q04724	770 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	LMAN2	Q12907	356 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	GNMT	Q14749	295 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	ARHGAP19	Q14CB8	494 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	ACOT6	Q3I5F7	207 aa	Predicted RBP	13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	ALG14	Q96F25	216 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	ADO	Q96SZ5	270 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	TMEM9B	Q9NQ34	198 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	ADAM29	Q9UKF5	820 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	B9D1	Q9UPM9	204 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320	PPIL1	Q9Y3C6	166 aa		13.15	□□□□□ -0.3
PAPOLA-223	ENST00000557320		A0A1B0GW64	132 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	FIGNL2	A6NMB9	653 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	DDAH2	O95865	285 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	CNN1	P51911	297 aa	Known RBP	13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	UNQ5815/PRO19632	Q6UWF5	114 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SULF2	Q8IWU5	870 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SEPSECS	Q9HD40	501 aa	Known RBP	13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	CLDN16	Q9Y5I7	305 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320		A0A0B4J2E0	115 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320		A0A1B0GUS0	222 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320		A0A1B0GX12	115 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320		A0A1W2PNV4	684 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	TDGF1	P13385	188 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	GABRA3	P34903	492 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	FCRL6	Q6DN72	434 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	FAM166A	Q6J272	317 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ASB5	Q8WWX0	329 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ZNF514	Q96K75	400 aa	Predicted RBP	13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	LRFN3	Q9BTN0	628 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	VCAN	P13611	3396 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	MUC3A	Q02505	3323 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	PRRT4	C9JH25	899 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	HCRTR2	O43614	444 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	LYPD3	O95274	346 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	HNRNPA3	P51991	378 aa	Known RBP	13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	MLF1	P58340	268 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	C22orf39	Q6P5X5	142 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320		Q6ZN92	141 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	C16orf82	Q7Z2V1	217 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ERAS	Q7Z444	233 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	TMEM256	Q8N2U0	113 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	OR10S1	Q8NGN2	331 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SPACA5	Q96QH8	159 aa		13.14	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SMPD2	O60906	423 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	HINT1	P49773	126 aa	Predicted RBP	13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	MFGE8	Q08431	387 aa	Predicted RBP	13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	IL15RA	Q13261	267 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	PRSS8	Q16651	343 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	TMEM215	Q68D42	235 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SPSB3	Q6PJ21	355 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	TMEM217	Q8N7C4	229 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	MFSD9	Q8NBP5	474 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	APH1A	Q96BI3	265 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	HHLA2	Q9UM44	414 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	NCOR1	O75376	2440 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	REN	P00797	406 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	IL24	Q13007	206 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ZNF266	Q14584	549 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	TRMT12	Q53H54	448 aa	Known RBP	13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	COA6	Q5JTJ3	125 aa	Known RBP	13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	KMT5C	Q86Y97	462 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SFTPA1	Q8IWL2	248 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	LRRC25	Q8N386	305 aa	Predicted RBP	13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SPEM1	Q8N4L4	309 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	FGGY	Q96C11	551 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	GABRG3	Q99928	467 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	VN1R1	Q9GZP7	353 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	CSTL1	Q9H114	145 aa		13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.13	□□□□□ -0.31
PAPOLA-223	ENST00000557320	FANCM	Q8IYD8	2048 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	CEBPZOS	A8MTT3	80 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320		A8MVM7	634 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320		K7EP13	123 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	SERPINA7	P05543	415 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	ZNF506	Q5JVG8	444 aa		13.12	□□□□□ -0.31
PAPOLA-223	ENST00000557320	GPR157	Q5UAW9	335 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms