RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 TMEM106AQ96A25 262 aa8.84□□□□□ -0.99
LINC00239-201ENST00000556973 CPNE2Q96FN4 548 aaPredicted RBP8.84□□□□□ -0.99
LINC00239-201ENST00000556973 PGLYRP3Q96LB9 341 aa8.84□□□□□ -0.99
LINC00239-201ENST00000556973 CNBD2Q96M20 576 aa8.84□□□□□ -0.99
LINC00239-201ENST00000556973 OCEL1Q9H607 264 aa8.84□□□□□ -0.99
LINC00239-201ENST00000556973 SEBOXQ9HB31 216 aaPredicted RBP8.84□□□□□ -0.99
LINC00239-201ENST00000556973 PAK1IP1Q9NWT1 392 aaPredicted RBP8.84□□□□□ -0.99
LINC00239-201ENST00000556973 RRP15Q9Y3B9 282 aaKnown RBP8.84□□□□□ -0.99
LINC00239-201ENST00000556973 TRBV5-5A0A0J9YX44 114 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 F8VVB4 439 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 F8VWA3 439 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 SPRY1O43609 319 aaPredicted RBP8.83□□□□□ -1
LINC00239-201ENST00000556973 TCF21O43680 179 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 GPX5O75715 221 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 INMTO95050 263 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 SELLP14151 372 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 NDUFB7P17568 137 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 CELP19835 753 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 CRHBPP24387 322 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 NPBWR2P48146 333 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 POU3F4P49335 361 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 BPIFB3P59826 476 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 RPS11P62280 158 aaKnown RBP eCLIP8.83□□□□□ -1
LINC00239-201ENST00000556973 ARF6P62330 175 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 PDCD1Q15116 288 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 SPHARQ15513 63 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 Q499Y3 187 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 METTL11BQ5VVY1 283 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 FIP1L1Q6UN15 594 aaKnown RBP8.83□□□□□ -1
LINC00239-201ENST00000556973 BATF2Q8N1L9 274 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 ZSCAN4Q8NAM6 433 aaPredicted RBP8.83□□□□□ -1
LINC00239-201ENST00000556973 ZNF418Q8TF45 676 aaPredicted RBP8.83□□□□□ -1
LINC00239-201ENST00000556973 H1FXQ92522 213 aaKnown RBP8.83□□□□□ -1
LINC00239-201ENST00000556973 WDFY2Q96P53 400 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 SPACA5Q96QH8 159 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 PCGF1Q9BSM1 259 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 FAM234AQ9H0X4 552 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 OR14J1Q9UGF5 321 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 GLS2Q9UI32 602 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 KPTNQ9Y664 436 aa8.83□□□□□ -1
LINC00239-201ENST00000556973 C2CD3Q4AC94 2353 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 PNMA8CA0A1B0GUJ8 204 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 RGS10O43665 173 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 KDM4BO94953 1096 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 TK1P04183 234 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 TMEM225BP0DP42 221 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 BCL3P20749 454 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 CEBPDP49716 269 aaPredicted RBP8.82□□□□□ -1
LINC00239-201ENST00000556973 CAPZA1P52907 286 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 PPP3R1P63098 170 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 COL10A1Q03692 680 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 GPR50Q13585 617 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 IRF3Q14653 427 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 ZNF146Q15072 292 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 MED22Q15528 200 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 SPIN3Q5JUX0 258 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 GPR157Q5UAW9 335 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 ASPHD2Q6ICH7 369 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 CRIP3Q6Q6R5 217 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 C1orf122Q6ZSJ8 110 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 USP43Q70EL4 1123 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 RNF144BQ7Z419 303 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 SATL1Q86VE3 508 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 CMTM4Q8IZR5 234 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 FAM58AQ8N1B3 248 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 BPIFB2Q8N4F0 458 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 MS4A15Q8N5U1 240 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 KIR3DL3Q8N743 410 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 TMEM185AQ8NFB2 350 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 OR5D13Q8NGL4 314 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 TBC1D15Q8TC07 691 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 THRSPQ92748 146 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 EMG1Q92979 244 aaKnown RBP8.82□□□□□ -1
LINC00239-201ENST00000556973 RFT1Q96AA3 541 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 OR5M11Q96RB7 305 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 GPER1Q99527 375 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 ZNF184Q99676 751 aaPredicted RBP8.82□□□□□ -1
LINC00239-201ENST00000556973 SUCNR1Q9BXA5 334 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 MS4A7Q9GZW8 240 aaPredicted RBP8.82□□□□□ -1
LINC00239-201ENST00000556973 SIRPDQ9H106 197 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 Q9H521 79 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 HMG20AQ9NP66 347 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 TMEM138Q9NPI0 162 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 TAS2R4Q9NYW5 299 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 CKLFQ9UBR5 152 aa8.82□□□□□ -1
LINC00239-201ENST00000556973 LSM2Q9Y333 95 aaKnown RBP8.82□□□□□ -1
LINC00239-201ENST00000556973 SONP18583 2426 aaKnown RBP8.81□□□□□ -1
LINC00239-201ENST00000556973 TRBV23-1A0A0A0MS06 115 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 IGKV1-12A0A0C4DH73 117 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 A0A1W2PPH5 198 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 K7N7A8 449 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 SH2D1BO14796 132 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 DENRO43583 198 aaKnown RBP8.81□□□□□ -1
LINC00239-201ENST00000556973 ANGPTL7O43827 346 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 IGKV1D-12P01611 117 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 IGHV4-38-2P0DP08 117 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 MMP9P14780 707 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 PRKACAP17612 351 aa8.81□□□□□ -1
LINC00239-201ENST00000556973 IGFBP3P17936 291 aaPredicted RBP8.81□□□□□ -1
LINC00239-201ENST00000556973 BDKRB2P30411 391 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms