RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 KPNB1Q14974 876 aaKnown RBP6.03□□□□□ -1.44
SCFD1-222ENST00000556768 DGUOKQ16854 277 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 TMEM244Q5VVB8 128 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 RUSC1-AS1Q66K80 236 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 MZT2AQ6P582 158 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 C17orf107Q6ZR85 190 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 POC1AQ8NBT0 407 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 C8orf46Q8TAG6 207 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 PP6455Q8WZ26 134 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 SDSLQ96GA7 329 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 HRASLS5Q96KN8 279 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 GAFA1Q96PS6 74 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 C9orf16Q9BUW7 83 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 HEXA-AS1Q9H8Q6 139 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 UNKLQ9H9P5 680 aaKnown RBP6.03□□□□□ -1.44
SCFD1-222ENST00000556768 SIRT7Q9NRC8 400 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 GPR173Q9NS66 373 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 GLS2Q9UI32 602 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 V9GYS6 101 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 MGAM2Q2M2H8 2515 aa6.03□□□□□ -1.44
SCFD1-222ENST00000556768 ARHGAP32A7KAX9 2087 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 IGKV1D-17A0A075B6S4 117 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 MDFIC2A0A1B0GVS7 189 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 A0A1B0GW55 424 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 EI24O14681 340 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 SPRY1O43609 319 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-222ENST00000556768 NOS1APO75052 506 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-222ENST00000556768 MELTFP08582 738 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 DUX4L2P0CJ85 424 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 DUX4L3P0CJ86 424 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 DUX4L4P0CJ87 422 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 DUX4L5P0CJ88 424 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 DUX4L6P0CJ89 424 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 DUX4L7P0CJ90 424 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 PGA5P0DJD9 388 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 RBP2P50120 134 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 UBE2E1P51965 193 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 SNRPGP62308 76 aaKnown RBP6.02□□□□□ -1.45
SCFD1-222ENST00000556768 ACTA2P62736 377 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 ACTG2P63267 376 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 SLC25A30Q5SVS4 291 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 TMEM42Q69YG0 159 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 DUX4L9Q6RFH8 374 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-222ENST00000556768 ACP7Q6ZNF0 438 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 GDPGP1Q6ZNW5 385 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 ZBTB49Q6ZSB9 765 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 CATSPERDQ86XM0 798 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 Q8IYB0 196 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 FAM185AQ8N0U4 392 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 ACBD7Q8N6N7 88 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 DTX3Q8N9I9 347 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 ZSCAN4Q8NAM6 433 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-222ENST00000556768 OR14K1Q8NGZ2 314 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 RORBQ92753 470 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 STMN2Q93045 179 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 TRIM63Q969Q1 353 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 RNFT2Q96EX2 444 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 BORCS8Q96FH0 119 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 C1orf147Q96MC9 270 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-222ENST00000556768 CHIAQ9BZP6 476 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 PKIBQ9C010 78 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 DUX4Q9UBX2 424 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 OR14J1Q9UGF5 321 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 GMPPBQ9Y5P6 360 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 SOX21Q9Y651 276 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-222ENST00000556768 PKD1L1Q8TDX9 2849 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 TRRAPQ9Y4A5 3859 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 A0A0U1RQK1 487 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 A0A1B0GTI1 187 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 PQLC2LA1A4F0 135 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 PRR32B1ATL7 298 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 H3BUI4 141 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 NPFFO15130 113 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 ENTPD6O75354 484 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 SRSF10O75494 262 aaKnown RBP6.02□□□□□ -1.45
SCFD1-222ENST00000556768 FADS2O95864 444 aaKnown RBP6.02□□□□□ -1.45
SCFD1-222ENST00000556768 CHRM2P08172 466 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 ZNF20P17024 532 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 CCL1P22362 96 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 PRKACBP22694 351 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 OMGP23515 440 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 IER3P46695 156 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 ATP1B3P54709 279 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 MTCP1P56278 107 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 ELF3P78545 371 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-222ENST00000556768 IL24Q13007 206 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 ZIK1Q3SY52 487 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-222ENST00000556768 ANGPTL5Q86XS5 388 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 EGFL6Q8IUX8 553 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 MKXQ8IYA7 352 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 ENTHD1Q8IYW4 607 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 CBR4Q8N4T8 237 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 RNF152Q8N8N0 203 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 ASCC1Q8N9N2 400 aaKnown RBP6.02□□□□□ -1.45
SCFD1-222ENST00000556768 OR5R1Q8NH85 324 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 TRMT10AQ8TBZ6 339 aaKnown RBP6.02□□□□□ -1.45
SCFD1-222ENST00000556768 CHST5Q9GZS9 411 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 SLITRK2Q9H156 845 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 USE1Q9NZ43 259 aa6.02□□□□□ -1.45
SCFD1-222ENST00000556768 MAB21L2Q9Y586 359 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms