RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 FBLN5Q9UBX5 448 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 POLDIP2Q9Y2S7 368 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 WIPI2Q9Y4P8 454 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 NPTNQ9Y639 398 aa9.18□□□□□ -0.94
SHMT2-218ENST00000555213 FAM230AA0A1W2PPH8 454 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 PQLC2LA1A4F0 135 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 FABP12A6NFH5 140 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 TMEM14DPA8MWL7 114 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 J3QT63 122 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 CDIPTO14735 213 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 CYB5AP00167 134 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 CYB5R3P00387 301 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-218ENST00000555213 HLA-DQB1P01920 261 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 HCKP08631 526 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 VSIG8P0DPA2 414 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 CD99P14209 185 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 CD40LGP29965 261 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 MDH2P40926 338 aaKnown RBP9.17□□□□□ -0.94
SHMT2-218ENST00000555213 HAAOP46952 286 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 OR3A4PP47883 348 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 POU3F4P49335 361 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 RBP2P50120 134 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 ATP1B3P54709 279 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 LOXL1Q08397 574 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-218ENST00000555213 UNC119Q13432 240 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 MADCAM1Q13477 382 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 BAK1Q16611 211 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 HAGHLQ6PII5 290 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-218ENST00000555213 LHFPL2Q6ZUX7 228 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 WDR86Q86TI4 376 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 LRRC28Q86X40 367 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-218ENST00000555213 JAGN1Q8N5M9 183 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 BOLLQ8N9W6 283 aaKnown RBP9.17□□□□□ -0.94
SHMT2-218ENST00000555213 SCCPDHQ8NBX0 429 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 OR10Z1Q8NGY1 313 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 ZNF671Q8TAW3 534 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 LRRC29Q8WV35 223 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 RAB39BQ96DA2 213 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 C18orf12Q96KH6 178 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 COX4I2Q96KJ9 171 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 WDR12Q9GZL7 423 aaKnown RBP9.17□□□□□ -0.94
SHMT2-218ENST00000555213 OR51I2Q9H344 312 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 HMG20AQ9NP66 347 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 PCDHB10Q9UN67 800 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 ETV7Q9Y603 341 aa9.17□□□□□ -0.94
SHMT2-218ENST00000555213 PPIAL4EA0A075B759 164 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 IGHV4-61A0A0C4DH41 118 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 IGKV1-12A0A0C4DH73 117 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 PPIAL4DF5H284 164 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 SMAD7O15105 426 aaKnown RBP9.16□□□□□ -0.94
SHMT2-218ENST00000555213 FSTL3O95633 263 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 IGKV1D-12P01611 117 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 IGHV2-70P01814 119 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 PPIAL4FP0DN26 164 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 FOSL1P15407 271 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 PTBP1P26599 531 aaKnown RBP eCLIP9.16□□□□□ -0.94
SHMT2-218ENST00000555213 PTGFRP43088 359 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 MTCP1P56278 107 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 TMEM155Q4W5P6 130 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 FAM76BQ5HYJ3 339 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 UBE2NLQ5JXB2 153 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 GLIPR1L1Q6UWM5 242 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 WDR82Q6UXN9 313 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 ZNF826PQ6ZT77 177 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 TMEM104Q8NE00 496 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 BORCS5Q969J3 196 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 PTX4Q96A99 478 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 RFT1Q96AA3 541 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 CYYR1Q96J86 154 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 PKIBQ9C010 78 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 NARFLQ9H6Q4 476 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 DCAF16Q9NXF7 216 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 EXTL2Q9UBQ6 330 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 PPIAL4AQ9Y536 164 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 ITPR3Q14573 2671 aa9.16□□□□□ -0.94
SHMT2-218ENST00000555213 CSMD2Q7Z408 3487 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 A0A0A6YYD4 124 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 TRAV38-1A0A0B4J264 116 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 A0A0G2JMP0 313 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 A0A0X1KG70 313 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 A0A1W2PP11 408 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 OOEPA6NGQ2 149 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 FAM25AB3EWG3 89 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 FAM25CB3EWG5 89 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 FAM25GB3EWG6 89 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 LGALS8O00214 317 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 BPNT1O95861 308 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 ARSBP15848 533 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 CPT2P23786 658 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 CFHR2P36980 270 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 PMELP40967 661 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 DCTN2Q13561 401 aaKnown RBP9.15□□□□□ -0.94
SHMT2-218ENST00000555213 ZMYND11Q15326 602 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 MICBQ29980 383 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 SMIM21Q3B7S5 101 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 SPANXN2Q5MJ10 180 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 FAM131AQ6UXB0 335 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 NLRC3Q7RTR2 1065 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 CALHM1Q8IU99 346 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 IZUMO1Q8IYV9 350 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms