RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 YY1AP1Q9H869 796 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 ABCB9Q9NP78 766 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 RPRD1BQ9NQG5 326 aaKnown RBP3.8□□□□□ -1.8
ATXN3-229ENST00000554672 CENPMQ9NSP4 180 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 MRPL22Q9NWU5 206 aaKnown RBP3.8□□□□□ -1.8
ATXN3-229ENST00000554672 RASL12Q9NYN1 266 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 RHCGQ9UBD6 479 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.8□□□□□ -1.8
ATXN3-229ENST00000554672 ZNF222Q9UK12 451 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 ZNF256Q9Y2P7 627 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-229ENST00000554672 HILPDAQ9Y5L2 63 aa3.8□□□□□ -1.8
ATXN3-229ENST00000554672 V9GYY5 206 aaPredicted RBP3.8□□□□□ -1.8
ATXN3-229ENST00000554672 OR6C68A6NDL8 312 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 RFPL4AA6NLU0 287 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 ZNF850A8MQ14 1090 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 SEC14L6B5MCN3 397 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 RFPL4AL1F8VTS6 287 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 J3KTA2 159 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 SLC1A7O00341 560 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 TRIAP1O43715 76 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 IDH3BO43837 385 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 OR2F2O95006 317 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 CST4P01036 141 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 APOC1P02654 83 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 RBP4P02753 201 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 ANXA2P07355 339 aaKnown RBP3.79□□□□□ -1.8
ATXN3-229ENST00000554672 ZNF728P0DKX0 622 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 IGHV1-8P0DP01 117 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 SLC2A1P11166 492 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 H2AFXP16104 143 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-229ENST00000554672 HIST1H1CP16403 213 aaKnown RBP3.79□□□□□ -1.8
ATXN3-229ENST00000554672 ANOS1P23352 680 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 DCTDP32321 178 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 SLC15A1P46059 708 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 VEGFCP49767 419 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 LUMP51884 338 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-229ENST00000554672 ARHGDIBP52566 201 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 DLX6P56179 175 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 RAB25P57735 213 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 MAGOHP61326 146 aaKnown RBP3.79□□□□□ -1.8
ATXN3-229ENST00000554672 ZNF273Q14593 569 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 GFOD2Q3B7J2 385 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 C9orf152Q5JTZ5 239 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 SMARCD3Q6STE5 483 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 ZBTB49Q6ZSB9 765 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 C18orf65Q6ZTR6 163 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 KCTD8Q6ZWB6 473 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 ZNF329Q86UD4 541 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 ZDHHC21Q8IVQ6 265 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 TIGD4Q8IY51 512 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 CD177Q8N6Q3 437 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 KLHL30-AS1Q8NEE0 82 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 OR5M8Q8NGP6 311 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 NDNFQ8TB73 568 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 CHPT1Q8WUD6 406 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 PIGCQ92535 297 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 ISOC1Q96CN7 298 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 RSRC1Q96IZ7 334 aaKnown RBP3.79□□□□□ -1.8
ATXN3-229ENST00000554672 LYZL4Q96KX0 146 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 RBM14Q96PK6 669 aaKnown RBP3.79□□□□□ -1.8
ATXN3-229ENST00000554672 ERMAPQ96PL5 475 aaPredicted RBP3.79□□□□□ -1.8
ATXN3-229ENST00000554672 CDRT15Q96T59 188 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 EBF4Q9BQW3 602 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 SLC25A33Q9BSK2 321 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 OR51I2Q9H344 312 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 RGCCQ9H4X1 137 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 NKIRAS1Q9NYS0 192 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 SNX13Q9Y5W8 968 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 LYVE1Q9Y5Y7 322 aa3.79□□□□□ -1.8
ATXN3-229ENST00000554672 HUWE1Q7Z6Z7 4374 aaKnown RBP3.79□□□□□ -1.8
ATXN3-229ENST00000554672 hCG_38984A0A1B0GV85 526 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 A0A1W2PRQ8 180 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 RBMY1BA6NDE4 496 aaKnown RBP3.78□□□□□ -1.8
ATXN3-229ENST00000554672 RBMY1EA6NEQ0 496 aaKnown RBP3.78□□□□□ -1.8
ATXN3-229ENST00000554672 SH2D7A6NKC9 451 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-229ENST00000554672 ZNF732B4DXR9 585 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 ZNF593O00488 134 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-229ENST00000554672 SLC22A2O15244 555 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 NPPAP01160 153 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 TK1P04183 234 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 SNRNP70P08621 437 aaKnown RBP3.78□□□□□ -1.8
ATXN3-229ENST00000554672 RBMY1DP0C7P1 496 aaKnown RBP3.78□□□□□ -1.8
ATXN3-229ENST00000554672 CD24P25063 80 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 HTR1DP28221 377 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 SLC6A6P31641 620 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 OMPP47874 163 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 OR3A4PP47883 348 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 CX3CR1P49238 355 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 INSL3P51460 131 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 FXYD6P3P58550 94 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 GRB2P62993 217 aaKnown RBP3.78□□□□□ -1.8
ATXN3-229ENST00000554672 GNG3P63215 75 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 SLC35B1P78383 322 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 PRDX4Q13162 271 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 KLF9Q13886 244 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-229ENST00000554672 DGCR6Q14129 220 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 GALEQ14376 348 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 KIR2DS1Q14954 304 aa3.78□□□□□ -1.8
ATXN3-229ENST00000554672 LRRC23Q53EV4 343 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-229ENST00000554672 KLHL12Q53G59 568 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms