RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 H2BFMP0C1H6 154 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 DUX4L2P0CJ85 424 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 DUX4L3P0CJ86 424 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 DUX4L4P0CJ87 422 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 DUX4L5P0CJ88 424 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 DUX4L6P0CJ89 424 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 DUX4L7P0CJ90 424 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 PPIAL4GP0DN37 164 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 IGHV4-38-2P0DP08 117 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 IRF2P14316 349 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 PAICSP22234 425 aaKnown RBP3.42□□□□□ -1.86
VTI1B-203ENST00000554636 ACKR3P25106 362 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 HSD11B1P28845 292 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 HOXD3P31249 432 aaPredicted RBP3.42□□□□□ -1.86
VTI1B-203ENST00000554636 DDOSTP39656 456 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 PSMB10P40306 273 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 SLC15A1P46059 708 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 PITPNBP48739 271 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 HCCSP53701 268 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 CRISP1P54107 249 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 ZP1P60852 638 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 GNB2P62879 340 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 UBA52P62987 128 aaKnown RBP3.42□□□□□ -1.86
VTI1B-203ENST00000554636 CSNK2BP67870 215 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 EFNB1P98172 346 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 MFGE8Q08431 387 aaPredicted RBP3.42□□□□□ -1.86
VTI1B-203ENST00000554636 SCGB2A2Q13296 93 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 APOFQ13790 326 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 OR8B8Q15620 311 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 SNAPC1Q16533 368 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 ARMCX4Q5H9R4 360 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 LCN1P1Q5VSP4 162 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 AADACL4Q5VUY2 407 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 C1orf146Q5VVC0 180 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 SLX4IPQ5VYV7 408 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 TEX36Q5VZQ5 186 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 C12orf73Q69YU5 71 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 KDM4DQ6B0I6 523 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 DGAT2L7PQ6IED9 249 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 DUX4L9Q6RFH8 374 aaPredicted RBP3.42□□□□□ -1.86
VTI1B-203ENST00000554636 LRRN1Q6UXK5 716 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 ASRGL1Q7L266 308 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 KRT74Q7RTS7 529 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 C1orf87Q8N0U7 546 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 GCSAMQ8N6F7 178 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 SIGLECL1Q8N7X8 197 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 SPERTQ8NA61 448 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 OR1M1Q8NGA1 313 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 OR52H1Q8NGJ2 320 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF418Q8TF45 676 aaPredicted RBP3.42□□□□□ -1.86
VTI1B-203ENST00000554636 THEM6Q8WUY1 208 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 ZFAND2BQ8WV99 257 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 HPSE2Q8WWQ2 592 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 UPRTQ96BW1 309 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 PGAM5Q96HS1 289 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 C1orf147Q96MC9 270 aaPredicted RBP3.42□□□□□ -1.86
VTI1B-203ENST00000554636 OR8B4Q96RC9 309 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 PAPOLGQ9BWT3 736 aaKnown RBP3.42□□□□□ -1.86
VTI1B-203ENST00000554636 SUCNR1Q9BXA5 334 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 TTTY10Q9BZA0 68 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 YIPF3Q9GZM5 350 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 TLNRD1Q9H1K6 362 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 RGCCQ9H4X1 137 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 SP140LQ9H930 580 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 ADGRL4Q9HBW9 690 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 C1orf123Q9NWV4 160 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 FAM206AQ9NX38 181 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 TVP23BQ9NYZ1 205 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 KIF17Q9P2E2 1029 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 DUX4Q9UBX2 424 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF69Q9UC07 566 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 NUP50Q9UKX7 468 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 RHBDD3Q9Y3P4 386 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 PCDHGB1Q9Y5G3 927 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 N6AMT1Q9Y5N5 214 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 SOX21Q9Y651 276 aaPredicted RBP3.42□□□□□ -1.86
VTI1B-203ENST00000554636 AUP1Q9Y679 476 aa3.42□□□□□ -1.86
VTI1B-203ENST00000554636 IGHV3OR15-7A0A075B7D8 119 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 IGHV3OR16-10A0A075B7F0 116 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 TRAV38-1A0A0B4J264 116 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 A0A0U1RQV5 110 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 KIR2DS1A0A191URI9 304 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 MDFIC2A0A1B0GVS7 189 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 TMEM89A2RUT3 159 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 ACOD1A6NK06 481 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 ZNF850A8MQ14 1090 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 SRRM5B3KS81 715 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 E9PQ18 207 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 G3V2T6 193 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 TRIM77I1YAP6 450 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 ADAM20O43506 726 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 ENSAO43768 121 aaKnown RBP3.41□□□□□ -1.86
VTI1B-203ENST00000554636 ATP5HO75947 161 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 CST4P01036 141 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 GYPAP02724 150 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 FCGR1AP12314 374 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 MMP9P14780 707 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 CFL1P23528 166 aaKnown RBP3.41□□□□□ -1.86
VTI1B-203ENST00000554636 FASP25445 335 aa3.41□□□□□ -1.86
VTI1B-203ENST00000554636 DCTDP32321 178 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms