RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 CRTAPO75718 401 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-208ENST00000553868 PLATP00750 562 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 HAAOP46952 286 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 QRFPP83859 136 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 NKPD1Q17RQ9 610 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 ALKBH6Q3KRA9 238 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 SLC22A6Q4U2R8 563 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 PYDC2Q56P42 97 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 TMEM69Q5SWH9 247 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 SLC25A26Q70HW3 274 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 ZNF611Q8N823 705 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 DIRC2Q96SL1 478 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 SOSTQ9BQB4 213 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 MRPL37Q9BZE1 423 aaKnown RBP12.25□□□□□ -0.45
SHMT2-208ENST00000553868 PLK3Q9H4B4 646 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 PPP1R3EQ9H7J1 279 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 RHOFQ9HBH0 211 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 TAAR3PQ9P1P4 343 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 POLDIP2Q9Y2S7 368 aa12.25□□□□□ -0.45
SHMT2-208ENST00000553868 SHISA9B4DS77 424 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 J3QRK9 145 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 XRCC3O43542 346 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 CDC14BO60729 498 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 MPIG6BO95866 241 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 PLAUP00749 431 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 CHRM2P08172 466 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 OR4A8P0C604 315 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 GTF2F2P13984 249 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 TNFSF4P23510 183 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 MNDAP41218 407 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 MRPS10P82664 201 aaKnown RBP12.24□□□□□ -0.45
SHMT2-208ENST00000553868 IL24Q13007 206 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 HIST2H2BDQ6DRA6 164 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 HAGHLQ6PII5 290 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-208ENST00000553868 CRIP3Q6Q6R5 217 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 C12orf54Q6X4T0 127 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 RNF144BQ7Z419 303 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 OR51F2Q8NH61 342 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 DVL3Q92997 716 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-208ENST00000553868 C1orf147Q96MC9 270 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-208ENST00000553868 NUDT16L1Q9BRJ7 211 aaKnown RBP12.24□□□□□ -0.45
SHMT2-208ENST00000553868 SRRQ9GZT4 340 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 OR51I2Q9H344 312 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 ZDHHC8Q9ULC8 765 aa12.24□□□□□ -0.45
SHMT2-208ENST00000553868 YLPM1P49750 1951 aaKnown RBP12.23□□□□□ -0.45
SHMT2-208ENST00000553868 TRAPPC2LH3BP13 241 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 H3BUI4 141 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 MLNRO43193 412 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 ANGPTL7O43827 346 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 HTR3BO95264 441 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 MGMTP16455 207 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 SERPINA2P20848 420 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 CPT2P23786 658 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 CDK2P24941 298 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 MPZP25189 248 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 APOBEC3AP31941 199 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-208ENST00000553868 SERPINF1P36955 418 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 ZNF81P51508 661 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 EFNB2P52799 333 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 UNC119Q13432 240 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 ARL6IP1Q15041 203 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 ADIPOQQ15848 244 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 MSMPQ1L6U9 139 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 ZNF181Q2M3W8 571 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 FAM76BQ5HYJ3 339 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 TMEM255AQ5JRV8 349 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 OR10K2Q6IF99 312 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 C1QL2Q7Z5L3 287 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 LRP11Q86VZ4 500 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 Q8IYB0 196 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 CELF2-AS1Q8N7Q2 184 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 OR2Z1Q8NG97 314 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 OR56B1Q8NGI3 324 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 C1orf159Q96HA4 380 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 FGF23Q9GZV9 251 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-208ENST00000553868 SHARPINQ9H0F6 387 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 KCNK15Q9H427 330 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 MSL2Q9HCI7 577 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 MYEF2Q9P2K5 600 aaKnown RBP12.23□□□□□ -0.45
SHMT2-208ENST00000553868 FBXO9Q9UK97 447 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-208ENST00000553868 LAMP3Q9UQV4 416 aa12.23□□□□□ -0.45
SHMT2-208ENST00000553868 MRPS7Q9Y2R9 242 aaKnown RBP12.23□□□□□ -0.45
SHMT2-208ENST00000553868 NBEAL2Q6ZNJ1 2754 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 A0A0G2JMP0 313 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 A0A0X1KG70 313 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 CTDSPLO15194 276 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 CD200P41217 278 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 SRP9P49458 86 aaKnown RBP12.22□□□□□ -0.45
SHMT2-208ENST00000553868 TAS2R20P59543 309 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 RPS27AP62979 156 aaKnown RBP12.22□□□□□ -0.45
SHMT2-208ENST00000553868 EFNB3Q15768 340 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 ZNF79Q15937 498 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 Q6ZR03 302 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 CALHM1Q8IU99 346 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 OR8H2Q8N162 312 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 OSR2Q8N2R0 312 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 OR4M2Q8NGB6 313 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 OR10AD1Q8NGE0 317 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 ELMOD3Q96FG2 381 aa12.22□□□□□ -0.45
SHMT2-208ENST00000553868 DHRS9Q9BPW9 319 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms