RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 TEAD3Q99594 435 aa8.03□□□□□ -1.12
ACTN1-210ENST00000553779 NECAP2Q9NVZ3 263 aa8.03□□□□□ -1.12
ACTN1-210ENST00000553779 FAM206AQ9NX38 181 aa8.03□□□□□ -1.12
ACTN1-210ENST00000553779 NUFIP1Q9UHK0 495 aaKnown RBP8.03□□□□□ -1.12
ACTN1-210ENST00000553779 SLC22A13Q9Y226 551 aa8.03□□□□□ -1.12
ACTN1-210ENST00000553779 TCF19Q9Y242 345 aa8.03□□□□□ -1.12
ACTN1-210ENST00000553779 NBEAL2Q6ZNJ1 2754 aa8.03□□□□□ -1.12
ACTN1-210ENST00000553779 ZNF670-ZNF695F2Z2N8 137 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 CLIC3O95833 236 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 CYB5AP00167 134 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 TK1P04183 234 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 OCM2P0CE71 109 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 OCMP0CE72 109 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-210ENST00000553779 HOXB6P17509 224 aaKnown RBP8.02□□□□□ -1.13
ACTN1-210ENST00000553779 RAB13P51153 203 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 LOXL3P58215 753 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 COL10A1Q03692 680 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 MFGE8Q08431 387 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-210ENST00000553779 ODF4Q2M2E3 257 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 OXLD1Q5BKU9 147 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 TMEM236Q5W0B7 351 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 ZNF322Q6U7Q0 402 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-210ENST00000553779 Q6ZPA2 131 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 ZNF676Q8N7Q3 588 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 ZNF714Q96N38 554 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 OR8B4Q96RC9 309 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 ADI1Q9BV57 179 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 MMP28Q9H239 520 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 ZNF702PQ9H963 129 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 S100A14Q9HCY8 104 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 GLS2Q9UI32 602 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 RAB26Q9ULW5 256 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 HILPDAQ9Y5L2 63 aa8.02□□□□□ -1.13
ACTN1-210ENST00000553779 hADV38S2A0JD32 116 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 A6NIN4 97 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 H3BSH0 61 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 DLGAP1O14490 977 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 GATBO75879 557 aaKnown RBP8.01□□□□□ -1.13
ACTN1-210ENST00000553779 RPP14O95059 124 aaKnown RBP8.01□□□□□ -1.13
ACTN1-210ENST00000553779 KRT8P05787 483 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 CHRM2P08172 466 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 ZNF728P0DKX0 622 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 SLC2A5P22732 501 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 GABRR1P24046 479 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 CXCR4P61073 352 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 MS4A2Q01362 244 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 IL18R1Q13478 541 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 DCTN2Q13561 401 aaKnown RBP8.01□□□□□ -1.13
ACTN1-210ENST00000553779 FLOT2Q14254 428 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 KPRPQ5T749 579 aaPredicted RBP8.01□□□□□ -1.13
ACTN1-210ENST00000553779 SLX4IPQ5VYV7 408 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 ZFP1Q6P2D0 407 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 IZUMO2Q6UXV1 221 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 CALHM1Q8IU99 346 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 SLC35F2Q8IXU6 374 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 ADGRG5Q8IZF4 528 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 HS3ST5Q8IZT8 346 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 YIPF7Q8N8F6 280 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 EMG1Q92979 244 aaKnown RBP8.01□□□□□ -1.13
ACTN1-210ENST00000553779 PHF21AQ96BD5 680 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 MALSU1Q96EH3 234 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 AKR1E2Q96JD6 320 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 CEP19Q96LK0 163 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 CITED2Q99967 270 aaPredicted RBP8.01□□□□□ -1.13
ACTN1-210ENST00000553779 NRIP2Q9BQI9 281 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 THTPAQ9BU02 230 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 CDCA4Q9BXL8 241 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 MRPS26Q9BYN8 205 aaKnown RBP8.01□□□□□ -1.13
ACTN1-210ENST00000553779 SLC25A19Q9HC21 320 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.01□□□□□ -1.13
ACTN1-210ENST00000553779 KRT84Q9NSB2 600 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 OR52A1Q9UKL2 312 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 SNX5Q9Y5X3 404 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 R4GMQ9 66 aa8.01□□□□□ -1.13
ACTN1-210ENST00000553779 PQLC2LA1A4F0 135 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 MEGF11A6BM72 1044 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 AQP12BA6NM10 295 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 H3BNX3 289 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 K7N7A8 449 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 SYT7O43581 403 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 TNFAIP8O95379 198 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 MPIG6BO95866 241 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 SERPINA3P01011 423 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 RBP4P02753 201 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 TTRP02766 147 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 IGHV1-8P0DP01 117 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 PRKACGP22612 351 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 PEX2P28328 305 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 SNU13P55769 128 aaKnown RBP8□□□□□ -1.13
ACTN1-210ENST00000553779 ACTA2P62736 377 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 ACTG2P63267 376 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 ACTC1P68032 377 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 ACTA1P68133 377 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 CDK5Q00535 292 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 ROM1Q03395 351 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 TMEM95Q3KNT9 176 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 C1orf146Q5VVC0 180 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 PLEKHG7Q6ZR37 379 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 ZBTB49Q6ZSB9 765 aa8□□□□□ -1.13
ACTN1-210ENST00000553779 FAM220AQ7Z4H9 259 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms