RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 EMG1Q92979 244 aaKnown RBP18.91■□□□□ 0.62
TDP1-206ENST00000553569 SLC25A10Q9UBX3 287 aaPredicted RBP18.91■□□□□ 0.62
TDP1-206ENST00000553569 KIR2DS1A0A191URI9 304 aa18.9■□□□□ 0.62
TDP1-206ENST00000553569 MAGEB3O15480 346 aa18.9■□□□□ 0.62
TDP1-206ENST00000553569 ALX3O95076 343 aa18.9■□□□□ 0.62
TDP1-206ENST00000553569 NDUFB7P17568 137 aa18.9■□□□□ 0.62
TDP1-206ENST00000553569 NPBWR2P48146 333 aa18.9■□□□□ 0.62
TDP1-206ENST00000553569 CAPZA1P52907 286 aa18.9■□□□□ 0.62
TDP1-206ENST00000553569 PPP3R1P63098 170 aa18.9■□□□□ 0.62
TDP1-206ENST00000553569 PAX8Q06710 450 aa18.9■□□□□ 0.62
TDP1-206ENST00000553569 PRSS48Q7RTY5 328 aa18.9■□□□□ 0.62
TDP1-206ENST00000553569 SATL1Q86VE3 508 aa18.9■□□□□ 0.62
TDP1-206ENST00000553569 ZNRF1Q8ND25 227 aa18.9■□□□□ 0.62
TDP1-206ENST00000553569 OR14A2Q96R54 314 aa18.9■□□□□ 0.62
TDP1-206ENST00000553569 RBFOX1Q9NWB1 397 aaKnown RBP18.9■□□□□ 0.62
TDP1-206ENST00000553569 METRNQ9UJH8 293 aa18.9■□□□□ 0.62
TDP1-206ENST00000553569 DENRO43583 198 aaKnown RBP18.89■□□□□ 0.61
TDP1-206ENST00000553569 RRP9O43818 475 aaKnown RBP18.89■□□□□ 0.61
TDP1-206ENST00000553569 KNG1P01042 644 aa18.89■□□□□ 0.61
TDP1-206ENST00000553569 IFNA2P01563 188 aa18.89■□□□□ 0.61
TDP1-206ENST00000553569 CALCBP10092 127 aa18.89■□□□□ 0.61
TDP1-206ENST00000553569 PRDX2P32119 198 aa18.89■□□□□ 0.61
TDP1-206ENST00000553569 MAP2K4P45985 399 aa18.89■□□□□ 0.61
TDP1-206ENST00000553569 SNU13P55769 128 aaKnown RBP18.89■□□□□ 0.61
TDP1-206ENST00000553569 ACSM1Q08AH1 577 aa18.89■□□□□ 0.61
TDP1-206ENST00000553569 KISS1Q15726 138 aa18.89■□□□□ 0.61
TDP1-206ENST00000553569 ARMCX4Q5H9R4 360 aa18.89■□□□□ 0.61
TDP1-206ENST00000553569 ZNF529Q6P280 563 aa18.89■□□□□ 0.61
TDP1-206ENST00000553569 CRIP3Q6Q6R5 217 aa18.89■□□□□ 0.61
TDP1-206ENST00000553569 Q8IYB0 196 aa18.89■□□□□ 0.61
TDP1-206ENST00000553569 NANPQ8TBE9 248 aa18.89■□□□□ 0.61
TDP1-206ENST00000553569 SDSLQ96GA7 329 aa18.89■□□□□ 0.61
TDP1-206ENST00000553569 NKX3-1Q99801 234 aaPredicted RBP18.89■□□□□ 0.61
TDP1-206ENST00000553569 ELL3Q9HB65 397 aaPredicted RBP18.89■□□□□ 0.61
TDP1-206ENST00000553569 IL36RNQ9UBH0 155 aa18.89■□□□□ 0.61
TDP1-206ENST00000553569 MAB21L2Q9Y586 359 aa18.89■□□□□ 0.61
TDP1-206ENST00000553569 SVEP1Q4LDE5 3571 aa18.88■□□□□ 0.61
TDP1-206ENST00000553569 IGKV1-12A0A0C4DH73 117 aa18.88■□□□□ 0.61
TDP1-206ENST00000553569 A0A1W2PPK0 400 aa18.88■□□□□ 0.61
TDP1-206ENST00000553569 ECDO95905 644 aaPredicted RBP18.88■□□□□ 0.61
TDP1-206ENST00000553569 IGKV1D-12P01611 117 aa18.88■□□□□ 0.61
TDP1-206ENST00000553569 CD1AP06126 327 aa18.88■□□□□ 0.61
TDP1-206ENST00000553569 HSMCR30P0CW71 290 aa18.88■□□□□ 0.61
TDP1-206ENST00000553569 FGF12P61328 243 aa18.88■□□□□ 0.61
TDP1-206ENST00000553569 PNLDC1Q8NA58 520 aaKnown RBP18.88■□□□□ 0.61
TDP1-206ENST00000553569 OR52N4Q8NGI2 321 aa18.88■□□□□ 0.61
TDP1-206ENST00000553569 CPNE2Q96FN4 548 aaPredicted RBP18.88■□□□□ 0.61
TDP1-206ENST00000553569 GPER1Q99527 375 aa18.88■□□□□ 0.61
TDP1-206ENST00000553569 CKLFQ9UBR5 152 aa18.88■□□□□ 0.61
TDP1-206ENST00000553569 RPUSD1Q9UJJ7 312 aaKnown RBP18.88■□□□□ 0.61
TDP1-206ENST00000553569 JMJD1CQ15652 2540 aa18.88■□□□□ 0.61
TDP1-206ENST00000553569 ZNF879B4DU55 563 aa18.87■□□□□ 0.61
TDP1-206ENST00000553569 TMEM225BP0DP42 221 aa18.87■□□□□ 0.61
TDP1-206ENST00000553569 PRKACAP17612 351 aa18.87■□□□□ 0.61
TDP1-206ENST00000553569 ZP1P60852 638 aa18.87■□□□□ 0.61
TDP1-206ENST00000553569 DDI2Q5TDH0 399 aa18.87■□□□□ 0.61
TDP1-206ENST00000553569 FIP1L1Q6UN15 594 aaKnown RBP18.87■□□□□ 0.61
TDP1-206ENST00000553569 FAM58AQ8N1B3 248 aa18.87■□□□□ 0.61
TDP1-206ENST00000553569 UFD1Q92890 307 aa18.87■□□□□ 0.61
TDP1-206ENST00000553569 TMED9Q9BVK6 235 aa18.87■□□□□ 0.61
TDP1-206ENST00000553569 FAM192AQ9GZU8 254 aa18.87■□□□□ 0.61
TDP1-206ENST00000553569 TRBV5-7A0A0A0MS05 114 aa18.86■□□□□ 0.61
TDP1-206ENST00000553569 GABRPO00591 440 aa18.86■□□□□ 0.61
TDP1-206ENST00000553569 EPHA1P21709 976 aa18.86■□□□□ 0.61
TDP1-206ENST00000553569 CAV3P56539 151 aa18.86■□□□□ 0.61
TDP1-206ENST00000553569 ZNF561Q8N587 486 aa18.86■□□□□ 0.61
TDP1-206ENST00000553569 ASCC1Q8N9N2 400 aaKnown RBP18.86■□□□□ 0.61
TDP1-206ENST00000553569 TNFAIP8L1Q8WVP5 186 aa18.86■□□□□ 0.61
TDP1-206ENST00000553569 DERL3Q96Q80 235 aa18.86■□□□□ 0.61
TDP1-206ENST00000553569 DCTN5Q9BTE1 182 aa18.86■□□□□ 0.61
TDP1-206ENST00000553569 TMEM138Q9NPI0 162 aa18.86■□□□□ 0.61
TDP1-206ENST00000553569 ONECUT1Q9UBC0 465 aa18.86■□□□□ 0.61
TDP1-206ENST00000553569 TRAV8-7A0A075B6U6 113 aa18.85■□□□□ 0.61
TDP1-206ENST00000553569 IGHV3OR16-10A0A075B7F0 116 aa18.85■□□□□ 0.61
TDP1-206ENST00000553569 GPR37O15354 613 aa18.85■□□□□ 0.61
TDP1-206ENST00000553569 KDM4BO94953 1096 aa18.85■□□□□ 0.61
TDP1-206ENST00000553569 FSHBP01225 129 aa18.85■□□□□ 0.61
TDP1-206ENST00000553569 LIPFP07098 398 aa18.85■□□□□ 0.61
TDP1-206ENST00000553569 IGFBP3P17936 291 aaPredicted RBP18.85■□□□□ 0.61
TDP1-206ENST00000553569 FSTP19883 344 aa18.85■□□□□ 0.61
TDP1-206ENST00000553569 DUSP1P28562 367 aa18.85■□□□□ 0.61
TDP1-206ENST00000553569 BDKRB2P30411 391 aa18.85■□□□□ 0.61
TDP1-206ENST00000553569 GABARAPL2P60520 117 aa18.85■□□□□ 0.61
TDP1-206ENST00000553569 COL10A1Q03692 680 aa18.85■□□□□ 0.61
TDP1-206ENST00000553569 C11orf91Q3C1V1 193 aa18.85■□□□□ 0.61
TDP1-206ENST00000553569 LIPKQ5VXJ0 399 aa18.85■□□□□ 0.61
TDP1-206ENST00000553569 SAXO1Q8IYX7 474 aa18.85■□□□□ 0.61
TDP1-206ENST00000553569 PCGF1Q9BSM1 259 aa18.85■□□□□ 0.61
TDP1-206ENST00000553569 TRAV40A0A0B4J280 105 aa18.84■□□□□ 0.61
TDP1-206ENST00000553569 A0A1W2PQ09 198 aa18.84■□□□□ 0.61
TDP1-206ENST00000553569 MAGEA13PA6NCF6 341 aa18.84■□□□□ 0.61
TDP1-206ENST00000553569 HAND1O96004 215 aa18.84■□□□□ 0.61
TDP1-206ENST00000553569 ALDOBP05062 364 aa18.84■□□□□ 0.61
TDP1-206ENST00000553569 SFTPBP07988 381 aa18.84■□□□□ 0.61
TDP1-206ENST00000553569 PPIAL4GP0DN37 164 aa18.84■□□□□ 0.61
TDP1-206ENST00000553569 TGFBR2P37173 567 aa18.84■□□□□ 0.61
TDP1-206ENST00000553569 ARF6P62330 175 aa18.84■□□□□ 0.61
TDP1-206ENST00000553569 INSL4Q14641 139 aa18.84■□□□□ 0.61
TDP1-206ENST00000553569 TBCEQ15813 527 aaPredicted RBP18.84■□□□□ 0.61
TDP1-206ENST00000553569 KLF17Q5JT82 389 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms