RNA–Protein interactions for RNA: ENST00000552491.5

LIMA1-212, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 2,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-212ENST00000552491 UMAD1C9J7I0 102 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 E5RGE8 158 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 LMO7DNF2Z398 122 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 IGHV2-70P01814 119 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 OR5H8P0DN80 308 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 OR13C7P0DN81 318 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 PNLIPP16233 465 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 CTSSP25774 331 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 S100PP25815 95 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 LTBRP36941 435 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 SUCLG1P53597 346 aaKnown RBP4.72□□□□□ -1.65
LIMA1-212ENST00000552491 FXYD4P59646 89 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 GRB2P62993 217 aaKnown RBP4.72□□□□□ -1.65
LIMA1-212ENST00000552491 CCL20P78556 96 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 ENDOGQ14249 297 aaKnown RBP4.72□□□□□ -1.65
LIMA1-212ENST00000552491 TAF9Q16594 264 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 SNAI3Q3KNW1 292 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 PHLDA2Q53GA4 152 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 SLC25A53Q5H9E4 307 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 NCMAPQ5T1S8 102 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 CDPF1Q6NVV7 123 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 PLXDC2Q6UX71 529 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 LRRC18Q8N456 261 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 HSD17B11Q8NBQ5 300 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 OR11L1Q8NGX0 322 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 AKR7LQ8NHP1 331 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 ZNF837Q96EG3 531 aaPredicted RBP4.72□□□□□ -1.65
LIMA1-212ENST00000552491 MALSU1Q96EH3 234 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 MRGPRX4Q96LA9 322 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 Q96M66 194 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 YPEL4Q96NS1 127 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 S100A13Q99584 98 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 RARRES2Q99969 163 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 PIGQQ9BRB3 760 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 GINS3Q9BRX5 216 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 EIF5A2Q9GZV4 153 aaKnown RBP4.72□□□□□ -1.65
LIMA1-212ENST00000552491 LMAN1LQ9HAT1 526 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 GPR173Q9NS66 373 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 FGF21Q9NSA1 209 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 C19orf12Q9NSK7 152 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 PLEKHJ1Q9NW61 149 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 LUZP4Q9P127 313 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 ANXA10Q9UJ72 324 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 PIGLQ9Y2B2 252 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 KCNIP3Q9Y2W7 256 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 NSG2Q9Y328 171 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 V9GYS6 101 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 ZNF407Q9C0G0 2248 aa4.72□□□□□ -1.65
LIMA1-212ENST00000552491 BORCS7-ASMTA0A0B4J1R7 106 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 SPRY1O43609 319 aaPredicted RBP4.71□□□□□ -1.65
LIMA1-212ENST00000552491 DHRS3O75911 302 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 OR2J2O76002 312 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 RD3LP0DJH9 198 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 MSX1P28360 303 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 P2RY1P47900 373 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 CSNK1A1P48729 337 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 CAMLGP49069 296 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 RAB5CP51148 216 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 ZNF41P51814 821 aaPredicted RBP4.71□□□□□ -1.65
LIMA1-212ENST00000552491 CLDN17P56750 224 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 STARD6P59095 220 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 RPS23P62266 143 aaKnown RBP4.71□□□□□ -1.65
LIMA1-212ENST00000552491 PDCD1Q15116 288 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 RHEBQ15382 184 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 TMEM176BQ3YBM2 270 aaPredicted RBP4.71□□□□□ -1.65
LIMA1-212ENST00000552491 GPR157Q5UAW9 335 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 C5orf24Q7Z6I8 188 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 CARFQ8N187 725 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 OR2M3Q8NG83 312 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 OR1J1Q8NGS3 322 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 OR2AE1Q8NHA4 323 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 TCTEX1D2Q8WW35 142 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 NANOS1Q8WY41 292 aaKnown RBP4.71□□□□□ -1.65
LIMA1-212ENST00000552491 PP6455Q8WZ26 134 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 HAS2Q92819 552 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 OXGR1Q96P68 337 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 CHST5Q9GZS9 411 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 CHRDQ9H2X0 955 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 NAA60Q9H7X0 242 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 ZNF160Q9HCG1 818 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 B3GALT1Q9Y5Z6 326 aa4.71□□□□□ -1.65
LIMA1-212ENST00000552491 IGHV3-15A0A0B4J1V0 119 aa4.71□□□□□ -1.66
LIMA1-212ENST00000552491 A0A0U1RQV5 110 aa4.71□□□□□ -1.66
LIMA1-212ENST00000552491 ZNF726A6NNF4 738 aa4.71□□□□□ -1.66
LIMA1-212ENST00000552491 ZNF727A8MUV8 499 aa4.71□□□□□ -1.66
LIMA1-212ENST00000552491 K7N7A8 449 aa4.71□□□□□ -1.66
LIMA1-212ENST00000552491 ATXN7O15265 892 aaPredicted RBP4.71□□□□□ -1.66
LIMA1-212ENST00000552491 GPR137BO60478 399 aa4.71□□□□□ -1.66
LIMA1-212ENST00000552491 HEXBP07686 556 aa4.71□□□□□ -1.66
LIMA1-212ENST00000552491 CD63P08962 238 aa4.71□□□□□ -1.66
LIMA1-212ENST00000552491 MAS1LP35410 378 aa4.71□□□□□ -1.66
LIMA1-212ENST00000552491 EIF2S3P41091 472 aaKnown RBP4.71□□□□□ -1.66
LIMA1-212ENST00000552491 ZNF133P52736 654 aaPredicted RBP4.71□□□□□ -1.66
LIMA1-212ENST00000552491 RAB1AP62820 205 aa4.71□□□□□ -1.66
LIMA1-212ENST00000552491 SLC35A1P78382 337 aa4.71□□□□□ -1.66
LIMA1-212ENST00000552491 CHAF1BQ13112 559 aa4.71□□□□□ -1.66
LIMA1-212ENST00000552491 HAGHQ16775 308 aa4.71□□□□□ -1.66
LIMA1-212ENST00000552491 PRAMEF20Q5VT98 475 aa4.71□□□□□ -1.66
LIMA1-212ENST00000552491 TMEM182Q6ZP80 229 aaPredicted RBP4.71□□□□□ -1.66
LIMA1-212ENST00000552491 C1QL4Q86Z23 238 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms