RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 DHRS9Q9BPW9 319 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 ANKRD60Q9BZ19 345 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 PTGES2Q9H7Z7 377 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 RNF122Q9H9V4 155 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 PRTFDC1Q9NRG1 225 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 PARVAQ9NVD7 372 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 FAIMQ9NVQ4 179 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 RMND1Q9NWS8 449 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 B3GNT2Q9NY97 397 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 CHMP5Q9NZZ3 219 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 DHRS4-AS1Q9P1J3 65 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 MYEF2Q9P2K5 600 aaKnown RBP2.89□□□□□ -1.95
LIMA1-208ENST00000551691 CLN8Q9UBY8 286 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 BTNL2Q9UIR0 455 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 FLVCR2Q9UPI3 526 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 SLC22A7Q9Y694 548 aa2.89□□□□□ -1.95
LIMA1-208ENST00000551691 WNK2Q9Y3S1 2297 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 A0A0J9YWU9 116 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 TMEM120BA0PK00 339 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 SERPINE3A8MV23 424 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 B4DSR2 109 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 H7C0C1 242 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 PSMD12O00232 456 aaPredicted RBP2.88□□□□□ -1.95
LIMA1-208ENST00000551691 NDUFAB1O14561 156 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 AIREO43918 545 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 GCM2O75603 506 aaPredicted RBP2.88□□□□□ -1.95
LIMA1-208ENST00000551691 CLIC3O95833 236 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 RPN2P04844 631 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 CSF3P09919 207 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 OR56A5P0C7T3 313 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 CFC1BP0CG36 223 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 CFC1P0CG37 223 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF708P17019 499 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 MT3P25713 68 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 VHLP40337 213 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 KIR2DS2P43631 304 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF83P51522 516 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 UGT2B15P54855 530 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 BTN3A2P78410 334 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 SELENBP1Q13228 472 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 PON3Q15166 354 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 STK11Q15831 433 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 SOHLH1Q5JUK2 328 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 ZFAND6Q6FIF0 208 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 OR52W1Q6IF63 320 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 ANKRD26P1Q6NSI1 321 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 TRIM40Q6P9F5 258 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF613Q6PF04 617 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 MOB1BQ7L9L4 216 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 PID1Q7Z2X4 250 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 SKA3Q8IX90 412 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 ZBED8Q8IZ13 594 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 PDIK1LQ8N165 341 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF567Q8N184 647 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 TCAIMQ8N3R3 496 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 WDSUB1Q8N9V3 476 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 INO80EQ8NBZ0 244 aaPredicted RBP2.88□□□□□ -1.95
LIMA1-208ENST00000551691 CSNK1G2-AS1Q8NCQ2 148 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 OR9G4Q8NGQ1 327 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 OR1J4Q8NGS1 313 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF502Q8TBZ5 544 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 MARCH1Q8TCQ1 289 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 CAPSLQ8WWF8 208 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 ASZ1Q8WWH4 475 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 RASL10AQ92737 203 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 COL21A1Q96P44 957 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 MS4A4EQ96PG1 132 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 SH3GL1Q99961 368 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 PELOQ9BRX2 385 aaKnown RBP2.88□□□□□ -1.95
LIMA1-208ENST00000551691 RSPO3Q9BXY4 272 aaPredicted RBP2.88□□□□□ -1.95
LIMA1-208ENST00000551691 SRXN1Q9BYN0 137 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 SELENOIQ9C0D9 397 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 POLR2J2Q9GZM3 115 aaKnown RBP2.88□□□□□ -1.95
LIMA1-208ENST00000551691 POLR2J3Q9H1A7 115 aaKnown RBP2.88□□□□□ -1.95
LIMA1-208ENST00000551691 SPNS1Q9H2V7 528 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 PIGUQ9H490 435 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 LYRM4Q9HD34 91 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 NECAP2Q9NVZ3 263 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 DCDC2Q9UHG0 476 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 OPN4Q9UHM6 478 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 GOLT1BQ9Y3E0 138 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 PCNX3Q9H6A9 2034 aa2.88□□□□□ -1.95
LIMA1-208ENST00000551691 HEATR1Q9H583 2144 aaKnown RBP2.87□□□□□ -1.95
LIMA1-208ENST00000551691 IGHV3OR16-10A0A075B7F0 116 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 IGHV7-81A0A0B4J1V7 117 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 MDFIC2A0A1B0GVS7 189 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 A0A1W2PPV4 95 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF705EA8MWA4 302 aaPredicted RBP2.87□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF879B4DU55 563 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 ICOSLGO75144 302 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 LYZL6O75951 148 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 DUSP14O95147 198 aaKnown RBP2.87□□□□□ -1.95
LIMA1-208ENST00000551691 IGKV3-20P01619 116 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 APOA1P02647 267 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 MSMBP08118 114 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 SMIM10L1P0DMW3 83 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 ERGP11308 486 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 ZNF43P17038 809 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 TBPP20226 339 aa2.87□□□□□ -1.95
LIMA1-208ENST00000551691 PSMB1P20618 241 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms